A4TED2 (A4TED2_MYCGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15 HAMAP MF_01341 RuleBase RU003889

Gene names

Name:	rplO HAMAP MF_01341
Ordered Locus Names:	Mflv_5028

Organism

Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP]

Taxonomic identifier

350054 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01341
Sequence similarities	Belongs to the ribosomal protein L15P family. HAMAP MF_01341 RuleBase RU003888

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01341
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01341 RuleBase RU003888 EMBL ABP47494.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4TED2 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 57CA83FA89DA9A0D	FASTA	148	15,735
	10 20 30 40 50 60 MSDPIKLHDL RPAPGEKTKK TRVGRGEGSK GKTAGRGTKG TKARKNVPVM FEGGQMPIHM 70 80 90 100 110 120 RLPKLKGFRN RFRTEYGVVN VGDLNKAFPE GGTVGVDELV AKGLVRKNVL VKVLGDGKLS 130 140 AKVDITAHKF SGSAREAITA AGGSVTEL

References

[1]

"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PYR-GCK.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000656 Genomic DNA. Translation: ABP47494.1.
RefSeq	YP_001136282.1. NC_009338.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4TED2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000024754; EBMYCP00000024416; EBMYCG00000024749.
GeneID	4976339.
GenomeReviews	Gene locus Mflv_5028 in contig CP000656_GR.
KEGG	mgi:Mflv_5028.
PATRIC	18038322. VBIMycGil17082_5127.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
GeneTree	EBGT00050000017661.
HOGENOM	HBG727142.
OMA	RKGRGHA.
ProtClustDB	PRK05592.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4TED2_MYCGI

Accession

Primary (citable) accession number: A4TED2

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)