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A4TDW1 (A4TDW1_MYCGI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
A4TDW1 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 1FD378CADBBC1CF5

FASTA51954,871
        10         20         30         40         50         60 
MAPPAQPPVR TPSRAELLAA LSIAIDLGLG QPAEHMLRSA VIATRIADRL GLDRAERDCT 

        70         80         90        100        110        120 
YYTALIMWIG CHADSHEYAR WFGDDIAVRR DSYLVDWSGL PYLRFLMANT GRGQPVLRRL 

       130        140        150        160        170        180 
SVLATLLADA RGQIAELIHS HCSSAGILAD RLGLSADVQT VLGYTFERFD GGGLPGGVGG 

       190        200        210        220        230        240 
DAIPIPMRVA QLADTAEVHH RTFGVDGAVA MARSRSGGQF DPRVVDAFLA DADAILEPPE 

       250        260        270        280        290        300 
DAWSAALREA PDYGTGLADG ELDELLVALG DFVDLKCPFT LGHSRAVAEL AAGAAALMGM 

       310        320        330        340        350        360 
DAGGVDLLRR AGHVHDVGRI GVSNQVWSKP STLTTGEMER VRLHPYLTVR ILSQVGGLDA 

       370        380        390        400        410        420 
VARVAGNHHE CLDGSGYPRG LPAAALSVPD RVLAAAVAYR SAVEPRPYRV ALSPAAAATR 

       430        440        450        460        470        480 
LRDRVREGHL DELAVDAVLS AAGHAARRVS ARPGGLTPRE IEVLCLVARG ASNKEIAATL 

       490        500        510 
GISGKTARNH VERTYAKIGA TNRIGASMFA LGHGLITPA 

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References

[1]"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PYR-GCK.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000656 Genomic DNA. Translation: ABP46757.1.
RefSeqYP_001135545.1. NC_009338.1.

3D structure databases

ProteinModelPortalA4TDW1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING350054.Mflv_4288.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP46757; ABP46757; Mflv_4288.
GeneID4975601.
KEGGmgi:Mflv_4288.
PATRIC18036804. VBIMycGil17082_4370.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2771.
HOGENOMHOG000268981.
OMATRCQRGA.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycMGIL350054:GHK8-4336-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4TDW1_MYCGI
AccessionPrimary (citable) accession number: A4TDW1
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)