A4TD88 (A4TD88_MYCGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Short-chain dehydrogenase/reductase SDR EMBL ABP46974.1

Gene names

Ordered Locus Names:

Mflv_4505

Organism

Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP]

Taxonomic identifier

350054 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	260 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family. RuleBase RU000363

Ontologies

Keywords
Domain	Signal EMBL ABP46974.1
Molecular function	Oxidoreductase RuleBase RU004267
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ABP46974.1
	Chain	30 – 260	231	Potential EMBL ABP46974.1		PRO_5000236353

Sequences

	Sequence		Length	Mass (Da)
	A4TD88 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 7C54BC889A352A72	FASTA	260	27,014
	10 20 30 40 50 60 MTGRLAGKVA LISGAARGMG ASHARVMAGH GAKVVCGDIL DSDGEAVAAE LGDAARYVHL 70 80 90 100 110 120 DVTSPDDWDR AVAAAVADFG GLDVLVNNAG ILNIGTVEDY ELSEWHRILD VNLTGVFLGI 130 140 150 160 170 180 RAATPTMKAA GRGSIINIAS IEGMAGTVGC HGYTATKFAV RGLTKSTALE LGPFGIRVNS 190 200 210 220 230 240 VHPGLVKTPM ADWVPEDIFQ SALGRIAQPH EVSNLVVYLA SDESSYSTGA EFVVDGGTLA 250 260 GLAHKDFSAV DVDQQPEWIT

References

[1]

"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PYR-GCK.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000656 Genomic DNA. Translation: ABP46974.1.
RefSeq	YP_001135762.1. NC_009338.1.
3D structure databases
ProteinModelPortal	A4TD88.
ModBase	Search...
Protein-protein interaction databases
STRING	A4TD88.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000025201; EBMYCP00000024863; EBMYCG00000025196.
GeneID	4975818.
GenomeReviews	Gene locus Mflv_4505 in contig CP000656_GR.
KEGG	mgi:Mflv_4505.
PATRIC	18037254. VBIMycGil17082_4594.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
GeneTree	EBGT00050000015165.
HOGENOM	HBG750976.
OMA	WQRILDI.
ProtClustDB	CLSK871992.
Family and domain databases
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. IPR020904. Sc_DH/Rdtase_CS. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00038.
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
PROSITE	PS00061. ADH_SHORT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4TD88_MYCGI

Accession

Primary (citable) accession number: A4TD88

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)