A4TD79 (A4TD79_MYCGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative GAF sensor protein EMBL ABP46987.1

Gene names

Ordered Locus Names:

Mflv_4519 EMBL ABP46987.1

Organism

Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP] EMBL ABP46987.1

Taxonomic identifier

350054 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium gilvum

Protein attributes

Sequence length	755 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Sensory transduction
Ligand	Chromophore
Molecular function	Photoreceptor protein RuleBase RU003590 Receptor
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	detection of visible light Inferred from electronic annotation. Source: InterPro protein-chromophore linkage Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro photoreceptor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4TD79 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 195F6ED86CB3400A	FASTA	755	81,762
	10 20 30 40 50 60 MTGPGPAGLD ASDGLVAVGT PIDLDNCARE PIHIPGSVQP RGVLVVVREP EFEVRQVSAN 70 80 90 100 110 120 VEELLGHPVE SVLGRHLSAL MGASQAARVQ QAASIVGDLH RRNPVECVLD VRGKSLEFDA 130 140 150 160 170 180 ILHREPGGVL LVELEVAFGA RPYSFPNTYQ AVRSSVEALN RATTMADLYD TAARSVRELT 190 200 210 220 230 240 GFDRVMVYRY DEEYNGEVVA EAKRDDLNSF LGLHYPSTDI PAQARALYEK NWLRLISDVD 250 260 270 280 290 300 YAPVPLVPAV DPAVGKPLDL THATLRSVSP IHIEYLQNMG VHASMSISLL RHGRLWGLIA 310 320 330 340 350 360 CHHYAGPHLP PFGNRAAAEF LGSTLSLRLV DQYEDDQLHR RLDAQAVLVK LTAATMNDGK 370 380 390 400 410 420 PLVSALLGAP DLLDLVPADG VVVDIGGHHR TRGSVPSPEV VAAVAAWARA AEDEIARSDS 430 440 450 460 470 480 LSRTLPDLDV DPALAAGALV LNLPDGQFAA WFRRESLRSV DWGGDPHNKA IAVSEGGEVR 490 500 510 520 530 540 LSPRKSFERW QEIVRDRGEP WTPTEIESAD MLRRHLVETL YHRTRGALRV AELVQRSLIP 550 560 570 580 590 600 DSIPDLESWE LTAHYEPAAG ERVGGDWYDA FELRDGRLIV VVGDVAGHGV TVAGTMAQLR 610 620 630 640 650 660 NALRAQLFAG AAPAEAVRQL NDFCVHLLRS AFATVLVARV DLDSGLVEAT SAGHLMPYLT 670 680 690 700 710 720 EGSATAVAAP IRLSPPIGLS SARYTQSTFT IEPGQCLVLY SDGLVERRGE VIDDGMDRLA 730 740 750 RGLGECAEPA AYPIWAALAS GHTEDDVTVV TLRRP

References

[1]

"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PYR-GCK EMBL ABP46987.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000656 Genomic DNA. Translation: ABP46987.1.
RefSeq	YP_001135775.1. NC_009338.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	350054.Mflv_4519.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP46987; ABP46987; Mflv_4519.
GeneID	4975831.
KEGG	mgi:Mflv_4519.
PATRIC	18037286. VBIMycGil17082_4610.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4251.
HOGENOM	HOG000266441.
OMA	RYPSSDI.
ProtClustDB	CLSK957307.
Enzyme and pathway databases
BioCyc	MGIL350054:GHK8-4569-MONOMER.
Family and domain databases
InterPro	IPR003018. GAF. IPR013654. PAS_2. IPR016132. Phyto_chromo_attachment. IPR001294. Phytochrome. IPR013515. Phytochrome_cen-reg. IPR001932. PP2C-like. [Graphical view]
Pfam	PF01590. GAF. 1 hit. PF08446. PAS_2. 1 hit. PF00360. PHY. 1 hit. PF07228. SpoIIE. 1 hit. [Graphical view]
PRINTS	PR01033. PHYTOCHROME.
SMART	SM00065. GAF. 1 hit. SM00331. PP2C_SIG. 1 hit. [Graphical view]
SUPFAM	SSF81606. PP2C-related. 1 hit.
PROSITE	PS50046. PHYTOCHROME_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4TD79_MYCGI

Accession

Primary (citable) accession number: A4TD79

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	May 29, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)