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Protein
Submitted name:

Putative GAF sensor protein

Gene

Mflv_4519

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. photoreceptor activity Source: UniProtKB-KW

GO - Biological processi

  1. detection of visible light Source: InterPro
  2. protein-chromophore linkage Source: UniProtKB-KW
  3. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Photoreceptor proteinUniRule annotation, Receptor

Keywords - Biological processi

Sensory transduction

Keywords - Ligandi

Chromophore

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-4569-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative GAF sensor proteinImported
Gene namesi
Ordered Locus Names:Mflv_4519Imported
OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
Taxonomic identifieri350054 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000232 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi350054.Mflv_4519.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiADCAREP.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4TD79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGPGPAGLD ASDGLVAVGT PIDLDNCARE PIHIPGSVQP RGVLVVVREP
60 70 80 90 100
EFEVRQVSAN VEELLGHPVE SVLGRHLSAL MGASQAARVQ QAASIVGDLH
110 120 130 140 150
RRNPVECVLD VRGKSLEFDA ILHREPGGVL LVELEVAFGA RPYSFPNTYQ
160 170 180 190 200
AVRSSVEALN RATTMADLYD TAARSVRELT GFDRVMVYRY DEEYNGEVVA
210 220 230 240 250
EAKRDDLNSF LGLHYPSTDI PAQARALYEK NWLRLISDVD YAPVPLVPAV
260 270 280 290 300
DPAVGKPLDL THATLRSVSP IHIEYLQNMG VHASMSISLL RHGRLWGLIA
310 320 330 340 350
CHHYAGPHLP PFGNRAAAEF LGSTLSLRLV DQYEDDQLHR RLDAQAVLVK
360 370 380 390 400
LTAATMNDGK PLVSALLGAP DLLDLVPADG VVVDIGGHHR TRGSVPSPEV
410 420 430 440 450
VAAVAAWARA AEDEIARSDS LSRTLPDLDV DPALAAGALV LNLPDGQFAA
460 470 480 490 500
WFRRESLRSV DWGGDPHNKA IAVSEGGEVR LSPRKSFERW QEIVRDRGEP
510 520 530 540 550
WTPTEIESAD MLRRHLVETL YHRTRGALRV AELVQRSLIP DSIPDLESWE
560 570 580 590 600
LTAHYEPAAG ERVGGDWYDA FELRDGRLIV VVGDVAGHGV TVAGTMAQLR
610 620 630 640 650
NALRAQLFAG AAPAEAVRQL NDFCVHLLRS AFATVLVARV DLDSGLVEAT
660 670 680 690 700
SAGHLMPYLT EGSATAVAAP IRLSPPIGLS SARYTQSTFT IEPGQCLVLY
710 720 730 740 750
SDGLVERRGE VIDDGMDRLA RGLGECAEPA AYPIWAALAS GHTEDDVTVV

TLRRP
Length:755
Mass (Da):81,762
Last modified:May 15, 2007 - v1
Checksum:i195F6ED86CB3400A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP46987.1.
RefSeqiWP_011895361.1. NC_009338.1.
YP_001135775.1. NC_009338.1.

Genome annotation databases

EnsemblBacteriaiABP46987; ABP46987; Mflv_4519.
KEGGimgi:Mflv_4519.
PATRICi18037286. VBIMycGil17082_4610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP46987.1.
RefSeqiWP_011895361.1. NC_009338.1.
YP_001135775.1. NC_009338.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi350054.Mflv_4519.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP46987; ABP46987; Mflv_4519.
KEGGimgi:Mflv_4519.
PATRICi18037286. VBIMycGil17082_4610.

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiADCAREP.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-4569-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PYR-GCKImported.

Entry informationi

Entry nameiA4TD79_MYCGI
AccessioniPrimary (citable) accession number: A4TD79
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: April 1, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.