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A4TC67 (RS2_MYCGI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
30S ribosomal protein S2
Gene names
Name:rpsB
Ordered Locus Names:Mflv_4133
OrganismMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP]
Taxonomic identifier350054 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length279 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 27927930S ribosomal protein S2 HAMAP MF_00291_B
PRO_1000078887

Sequences

Sequence LengthMass (Da)Tools
A4TC67 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 18B97DD01B86E55E

FASTA27930,350
        10         20         30         40         50         60 
MAVVTMKQLL DSGAHFGHQT RRWNPKMKRF IFTDRNGIYI IDLQQTLTYI DSAYEFVKET 

        70         80         90        100        110        120 
VAHGGSIMFV GTKKQAQESI AQEATRVGMP YVNQRWLGGM LTNFQTVHKR LQRMKELEAM 

       130        140        150        160        170        180 
EQTGGFEGRT KKEILMLTRE KNKLERSLGG IRDMAKVPSA IWVVDTNKEH LAVAEARKLN 

       190        200        210        220        230        240 
IPIIAILDTN CDPDVVDYPI PGNDDAIRSA ALLTKVIASA VAEGLQARAG AGADKAEAGQ 

       250        260        270 
DGAAAEPLAE WEQELLAGAT TAAPEAAAGE AAAAPEQSS

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PYR-GCK.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000656 Genomic DNA. Translation: ABP46603.1.
RefSeqYP_001135391.1. NC_009338.1.

3D structure databases

ProteinModelPortalA4TC67.
SMRA4TC67. Positions 6-229.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4TC67.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000024427; EBMYCP00000024089; EBMYCG00000024422.
GeneID4975447.
GenomeReviewsGene locus Mflv_4133 in contig CP000656_GR.
KEGGmgi:Mflv_4133.
PATRIC18036475. VBIMycGil17082_4208.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0052.
GeneTreeEBGT00050000017722.
HOGENOMHBG736296.
OMAKQAQDSV.
PhylomeDBA4TC67.
ProtClustDBPRK05299.

Enzyme and pathway databases

BioCycMGIL350054:MFLV_4133-MONOMER.

Family and domain databases

HAMAPMF_00291_B. Ribosomal_S2_B.
[Tree]
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
KOK02967.
PANTHERPTHR12534. Ribosom_S2_bac. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. Ribosomal_S2. 1 hit.
TIGRFAMsTIGR01011. RpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS2_MYCGI
AccessionPrimary (citable) accession number: A4TC67
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 15, 2007
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

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