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A4TBS1 (A4TBS1_MYCGI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length790 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance By similarity. RuleBase RU003847

Sequence similarities

Belongs to the relA/spoT family. RuleBase RU003847

Ontologies

Keywords
   Molecular functionTransferase EMBL ABP46284.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processguanosine tetraphosphate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionGTP diphosphokinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4TBS1 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 4571444222392033

FASTA79087,160
        10         20         30         40         50         60 
MADKVRTDPG SGQAVQTPPP AASASPETQP MEIVKPAPTS ASRRVRARLA RRMTSQRSTV 

        70         80         90        100        110        120 
NPVLEPLVAV HREIYPKADL TLLQKAYEVA EQRHADQLRK SGDPYITHPL AVANILAELG 

       130        140        150        160        170        180 
MDTTTLIAAL LHDTVEDTGY TLEALTQEFG VEVGHLVDGV TKLDKVALGT AAEGETIRKM 

       190        200        210        220        230        240 
IIAMARDPRV LVIKVADRLH NMRTMRFLPP EKQARKARET LEVIAPLAHR LGMATVKWEL 

       250        260        270        280        290        300 
EDLSFAILHP KKYEEIVRLV ADRAPSRDTY LAKVRAEITA TLNASKIKAT VEGRPKHYWS 

       310        320        330        340        350        360 
IYQKMIVKGR DFDDIHDLVG VRILCDEVRD CYAAVGVVHS LWQPIAGRFK DYIAQPRFGV 

       370        380        390        400        410        420 
YQSLHTTVVG PEGKPLEVQI RTIDMHKTAE YGIAAHWRYK EVKGRNGVPA GSAATEIDDM 

       430        440        450        460        470        480 
AWMRQLLDWQ REAADPGEFL ESLRYDLAVQ EIFVFTPKGD VITLPTGSTP VDFAYAVHTE 

       490        500        510        520        530        540 
VGHRCIGARV NGRLVALERK LENGEVVEVF TSKAQNAGPS RDWQGFVVSP RAKAKIRQWF 

       550        560        570        580        590        600 
AKERREEALD SGKEAIAREV RRGGLPLQRL MNAETMAALA RELRYLDVSA LYTAVGEGHV 

       610        620        630        640        650        660 
SARHVVQRLV AQLGGDDEAA DELAERSTPA TMPIRQRTSD DVGVAVPGAP GVLTKLAKCC 

       670        680        690        700        710        720 
TPVPGDNILG FVTRGGGVSV HRTDCTNAAS LEQQSERIID VQWAPSPSSV FLVAIQVEAL 

       730        740        750        760        770        780 
DRHRLLSDVT RVLADEKVNI LSASVTTSND RVAISRFTFE MGDPKHLGHV LNVVRNVEGV 

       790 
YDVYRVTSAA

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PYR-GCK EMBL ABP46284.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000656 Genomic DNA. Translation: ABP46284.1.
RefSeqYP_001135072.1. NC_009338.1.

3D structure databases

ProteinModelPortalA4TBS1.
ModBaseSearch...

Protein-protein interaction databases

STRING350054.Mflv_3812.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP46284; ABP46284; Mflv_3812.
GeneID4975128.
KEGGmgi:Mflv_3812.
PATRIC18035799. VBIMycGil17082_3874.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0317.
HOGENOMHOG000018301.
KOK00951.
OMAVEDTGYS.
ProtClustDBCLSK791939.

Enzyme and pathway databases

BioCycMGIL350054:GHK8-4209-MONOMER.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR026020. (p)ppGpp_Synthase.
IPR012675. Beta-grasp_dom.
IPR003607. HD/PDEase_dom.
IPR004811. RelA/Spo_fam.
IPR007685. RelA_SpoT.
IPR004095. TGS.
IPR012676. TGS-like.
[Graphical view]
PANTHERPTHR21262. PTHR21262. 1 hit.
PfamPF04607. RelA_SpoT. 1 hit.
PF02824. TGS. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
SM00954. RelA_SpoT. 1 hit.
[Graphical view]
SUPFAMSSF81271. TGS-like. 1 hit.
TIGRFAMsTIGR00691. spoT_relA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4TBS1_MYCGI
AccessionPrimary (citable) accession number: A4TBS1
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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