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Protein
Submitted name:

ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module

Gene

Mflv_1828

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMGIL350054:G1G8L-1858-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase moduleImported
Gene namesi
Ordered Locus Names:Mflv_1828Imported
OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
Taxonomic identifieri350054 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000000232 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi350054.Mflv_1828

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini553 – 675DNA_LIGASE_A3InterPro annotationAdd BLAST123

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiAAPRTWD
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04863 MtLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR033649 MtLigD_Pol-like
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A4T6Z6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVDRYDRVKL TNPDKVLYPA SGTTKAQVFE YYVNVAEGML PHIAGRAVTR
60 70 80 90 100
KRWPNGVEES SFFEKQLASS APDWLDRGTI AHKSGTTTYP VIDTVEGLAW
110 120 130 140 150
IAQQAALEVH VPQWRFTRGG QSGAADGGDG KPGPATRIVF DLDPGEGVTF
160 170 180 190 200
RQLCEVAHEV RELITDIGLT TFPLTSGSKG LHLYVPLEDP ISSRGASVLA
210 220 230 240 250
KRVAQQLEQS MPKRVTATMT KSLRDGKVFL DWSQNNGNKT TIAPYSLRGR
260 270 280 290 300
ERPTVAAPRT WDEIEDPDLR HLTFDEVLDR LERDGDLLAD LDPPLPATDK
310 320 330 340 350
LTRYRSMRDR TKTPEPVPAE PPETGANDKF VIQEHHARRL HYDFRLERDG
360 370 380 390 400
VLVSWAVPKN LPDTPSVNHL AVHTEDHPMD YIDFAGEIPK GEYGGGEVHI
410 420 430 440 450
WDTGTYETEK FRDNPPDGPA KGGEVIVTLH GQKIEGRYAL IQTDGKNWLA
460 470 480 490 500
HRMKDQQKPT AADLAPMLTT EGSVERLTRG QWAFEGKWDG YRLLVDADHG
510 520 530 540 550
KLTLRSRRGR DVTAEYPQLK ALAADLADHH VILDGEAVAL DEDGVPSFGE
560 570 580 590 600
MQNRARSTRV EFWAFDILFL DGRLLTKATY TDRRKLLEAL AEGGGLIVPP
610 620 630 640 650
ALEGDGPEAL EYARSQRWEG VIAKKRDSTY QPGRRSSAWI KDKIWNTQEV
660 670 680 690 700
VIGGWRQGEG GRTSGIGALV LGVPDDDGLH FVGRVGTGFT DKQLASLKKT
710 720 730 740 750
LEPLRTDESP FAAELPKQDA KGVTFVRPEL VGEVRYSERT SDGRLRQASW
760
RGLRDDKVPE DVRWEG
Length:766
Mass (Da):85,317
Last modified:May 15, 2007 - v1
Checksum:iCF2195716041FCEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA Translation: ABP44308.1
RefSeqiWP_011892719.1, NC_009338.1

Genome annotation databases

EnsemblBacteriaiABP44308; ABP44308; Mflv_1828
KEGGimgi:Mflv_1828

Similar proteinsi

Entry informationi

Entry nameiA4T6Z6_MYCGI
AccessioniPrimary (citable) accession number: A4T6Z6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: April 25, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health