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A4T6Z6

- A4T6Z6_MYCGI

UniProt

A4T6Z6 - A4T6Z6_MYCGI

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Protein
Submitted name:

ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module

Gene

Mflv_1828

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-1846-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase moduleImported
Gene namesi
Ordered Locus Names:Mflv_1828Imported
OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
Taxonomic identifieri350054 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000232: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi350054.Mflv_1828.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4T6Z6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVDRYDRVKL TNPDKVLYPA SGTTKAQVFE YYVNVAEGML PHIAGRAVTR
60 70 80 90 100
KRWPNGVEES SFFEKQLASS APDWLDRGTI AHKSGTTTYP VIDTVEGLAW
110 120 130 140 150
IAQQAALEVH VPQWRFTRGG QSGAADGGDG KPGPATRIVF DLDPGEGVTF
160 170 180 190 200
RQLCEVAHEV RELITDIGLT TFPLTSGSKG LHLYVPLEDP ISSRGASVLA
210 220 230 240 250
KRVAQQLEQS MPKRVTATMT KSLRDGKVFL DWSQNNGNKT TIAPYSLRGR
260 270 280 290 300
ERPTVAAPRT WDEIEDPDLR HLTFDEVLDR LERDGDLLAD LDPPLPATDK
310 320 330 340 350
LTRYRSMRDR TKTPEPVPAE PPETGANDKF VIQEHHARRL HYDFRLERDG
360 370 380 390 400
VLVSWAVPKN LPDTPSVNHL AVHTEDHPMD YIDFAGEIPK GEYGGGEVHI
410 420 430 440 450
WDTGTYETEK FRDNPPDGPA KGGEVIVTLH GQKIEGRYAL IQTDGKNWLA
460 470 480 490 500
HRMKDQQKPT AADLAPMLTT EGSVERLTRG QWAFEGKWDG YRLLVDADHG
510 520 530 540 550
KLTLRSRRGR DVTAEYPQLK ALAADLADHH VILDGEAVAL DEDGVPSFGE
560 570 580 590 600
MQNRARSTRV EFWAFDILFL DGRLLTKATY TDRRKLLEAL AEGGGLIVPP
610 620 630 640 650
ALEGDGPEAL EYARSQRWEG VIAKKRDSTY QPGRRSSAWI KDKIWNTQEV
660 670 680 690 700
VIGGWRQGEG GRTSGIGALV LGVPDDDGLH FVGRVGTGFT DKQLASLKKT
710 720 730 740 750
LEPLRTDESP FAAELPKQDA KGVTFVRPEL VGEVRYSERT SDGRLRQASW
760
RGLRDDKVPE DVRWEG
Length:766
Mass (Da):85,317
Last modified:May 15, 2007 - v1
Checksum:iCF2195716041FCEE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000656 Genomic DNA. Translation: ABP44308.1.
RefSeqiYP_001133096.1. NC_009338.1.

Genome annotation databases

EnsemblBacteriaiABP44308; ABP44308; Mflv_1828.
GeneIDi4973152.
KEGGimgi:Mflv_1828.
PATRICi18031743. VBIMycGil17082_1869.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000656 Genomic DNA. Translation: ABP44308.1 .
RefSeqi YP_001133096.1. NC_009338.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 350054.Mflv_1828.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABP44308 ; ABP44308 ; Mflv_1828 .
GeneIDi 4973152.
KEGGi mgi:Mflv_1828.
PATRICi 18031743. VBIMycGil17082_1869.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci MGIL350054:GHK8-1846-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PYR-GCKImported.

Entry informationi

Entry nameiA4T6Z6_MYCGI
AccessioniPrimary (citable) accession number: A4T6Z6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: October 29, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3