Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mflv_1273

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-1281-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mflv_1273Imported
OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
Taxonomic identifieri350054 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000232: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi350054.Mflv_1273.

Structurei

3D structure databases

ProteinModelPortaliA4T639.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4T639-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV
60 70 80 90 100
VLLSRSGKDL GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE
110 120 130 140 150
SLSQRIHPAE SRITLLSEQT PAHFIGFDAL ALGDTPLMKE PFRTRREALI
160 170 180 190 200
DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG AGLDGVIAKR LDGPYLPGKR
210 220 230 240 250
EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE LQMVGGAASF
260 270 280 290 300
TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY
310 320 330 340 350
DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER

S
Length:351
Mass (Da):39,837
Last modified:May 15, 2007 - v1
Checksum:iEDC9807FBF085B83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP43755.1.
RefSeqiWP_011892171.1. NC_009338.1.
YP_001132543.1. NC_009338.1.

Genome annotation databases

EnsemblBacteriaiABP43755; ABP43755; Mflv_1273.
GeneIDi4972599.
KEGGimgi:Mflv_1273.
PATRICi18030584. VBIMycGil17082_1300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP43755.1.
RefSeqiWP_011892171.1. NC_009338.1.
YP_001132543.1. NC_009338.1.

3D structure databases

ProteinModelPortaliA4T639.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi350054.Mflv_1273.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP43755; ABP43755; Mflv_1273.
GeneIDi4972599.
KEGGimgi:Mflv_1273.
PATRICi18030584. VBIMycGil17082_1300.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-1281-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PYR-GCKImported.

Entry informationi

Entry nameiA4T639_MYCGI
AccessioniPrimary (citable) accession number: A4T639
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: January 7, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.