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Protein
Submitted name:

DNA primase, small subunit

Gene

Mflv_1274

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-1282-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase, small subunitImported
Gene namesi
Ordered Locus Names:Mflv_1274Imported
OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
Taxonomic identifieri350054 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000232: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi350054.Mflv_1274.

Structurei

3D structure databases

ProteinModelPortaliA4T630.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

A4T630-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPSPATELDV DGVKVRFTNP DKPYFPKLGK NGTKGKLLEY YLAVADPMVT
60 70 80 90 100
LLRDRPVHLQ RFPDGIDGEE IYQKRVPQKH PDYLETCTVT FPSGRTADAL
110 120 130 140 150
KITHPSAIAW AAQMGTVTLH PWQVRCPDTE HPDELRIDLD PQPGTGFTEA
160 170 180 190 200
ADVAVGVLKP LLDELGLVGY PKTSGGRGVH VFLRIKTDWD FIAVRRAGIA
210 220 230 240 250
LAREVERRAP DAVTTSWWKE ERGKRLFIDY NQNARDRTFA SPYSARKTPI
260 270 280 290 300
ATVSTPLTWE ELRDAEPDDY TIQTVPDFIA GRPDPWAGID DNAQSIDTLL
310 320 330 340
EMVHADEERG EGDLPYPPSY PKMPGEPPRV QPSKKVAAHW DEHGNRIAD
Length:349
Mass (Da):39,078
Last modified:May 15, 2007 - v1
Checksum:iDB139FB2A50F44A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP43756.1.
RefSeqiWP_011892172.1. NC_009338.1.
YP_001132544.1. NC_009338.1.

Genome annotation databases

EnsemblBacteriaiABP43756; ABP43756; Mflv_1274.
GeneIDi4972600.
KEGGimgi:Mflv_1274.
PATRICi18030586. VBIMycGil17082_1301.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA. Translation: ABP43756.1.
RefSeqiWP_011892172.1. NC_009338.1.
YP_001132544.1. NC_009338.1.

3D structure databases

ProteinModelPortaliA4T630.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi350054.Mflv_1274.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP43756; ABP43756; Mflv_1274.
GeneIDi4972600.
KEGGimgi:Mflv_1274.
PATRICi18030586. VBIMycGil17082_1301.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciMGIL350054:GHK8-1282-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PYR-GCKImported.

Entry informationi

Entry nameiA4T630_MYCGI
AccessioniPrimary (citable) accession number: A4T630
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: February 4, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.