A4T433 (A4T433_MYCGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoamylase EMBL ABP43570.1

Gene names

Ordered Locus Names:

Mflv_1088

Organism

Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP]

Taxonomic identifier

350054 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	718 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase SAAS SAAS004193 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activity Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4T433 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 803413E26D71DFC6	FASTA	718	80,320
	10 20 30 40 50 60 MTTVVQPTTT HELWPGKAYP LGATYDGSGT NFALFSEAAE KVELCLFSDD ESGQTVETRV 70 80 90 100 110 120 TLPEVDGFVW HCFIPNIEPG QRYGYRVHGP YDPANGQRCN PNKLLLDPYS KAIDGNFDWN 130 140 150 160 170 180 QSLFSYNFGD PDSRNDDDSA DSMPKSVVIN PYFDWGVDRP PGHEYADTVI YEAHVKGLTQ 190 200 210 220 230 240 THPDIPEQIR GTYAAVAHPA IIDHLTALGV NAIELMPVHH FANDSTLIDK GLSNYWGYNT 250 260 270 280 290 300 IGFFAPDSKY SSNANPGGQV QEFKAMVRAL HEAGIEVILD VVYNHTAEGN HMGPTLSMRG 310 320 330 340 350 360 IDNAAYYHLV DDDKRYYMDY TGTGNSLNVS HPHSLQLLMD SLRYWVTEMH VDGFRFDLAS 370 380 390 400 410 420 TLAREFYEVD RLATFFELVQ QDPTVSQVKL IAEPWDVGPG GYQVGNFPPQ WTEWNGKYRD 430 440 450 460 470 480 TVRDFWRGEP ATLDEFAYRL TGSADLYEHT ARRPVASINF VIAHDGFTLR DLVSYNEKHN 490 500 510 520 530 540 EANGEDNNDG ESHNRSWNCG VEGPTDDPEI LALRSQQERN FLTTLLLSQG VPMMCHGDEL 550 560 570 580 590 600 GRTQGGNNNG YCQDNEITWI DWNNVDTGLL EFTRTVSQLR AAHPVFRRRR FFSGEPLGRR 610 620 630 640 650 660 GQEGLPDIAW FTPDGAEMTG EDWGSGFAKS VGVFLNGHGI PDMDPRGQRV IDDSFLLCFN 670 680 690 700 710 AHYEPIDFML PAAEFGGAWQ PVIYTVDGAV MEGSRPLPAE AKLTVEARAV MVLQATTT

References

[1]

"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PYR-GCK.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000656 Genomic DNA. Translation: ABP43570.1.
RefSeq	YP_001132358.1. NC_009338.1.
3D structure databases
ProteinModelPortal	A4T433.
ModBase	Search...
Protein-protein interaction databases
STRING	A4T433.
Protein family/group databases
CAZy	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000026588; EBMYCP00000026250; EBMYCG00000026583.
GeneID	4972414.
GenomeReviews	Gene locus Mflv_1088 in contig CP000656_GR.
KEGG	mgi:Mflv_1088.
PATRIC	18030198. VBIMycGil17082_1111.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1523.
GeneTree	EBGT00050000016656.
HOGENOM	HBG350946.
OMA	AGEMHID.
PhylomeDB	A4T433.
ProtClustDB	CLSK703901.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR011837. Glycogen_debranch_debranch. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K02438.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF74. PTHR10357:SF74. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02922. CBM_48. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR02100. GlgX_debranch. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4T433_MYCGI

Accession

Primary (citable) accession number: A4T433

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)