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A4T197 (Y5248_MYCGI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0234 protein Mflv_5248
Gene names
Ordered Locus Names:Mflv_5248
OrganismMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK)) [Complete proteome] [HAMAP]
Taxonomic identifier350054 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length163 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0234 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 163163UPF0234 protein Mflv_5248 HAMAP MF_00632
PRO_1000082629

Sequences

Sequence LengthMass (Da)Tools
A4T197 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: DFE4DD8E6EBC1F64

FASTA16318,108
        10         20         30         40         50         60 
MADSSFDIVS KVDRQEVDNA LNQAAKELAT RFDFRGTDTT IEWQGEEGII LVSSTEERVK 

        70         80         90        100        110        120 
AAVDVFKEKL IRRDISMKAF DAGDPQPSGK TYKVIGSIKQ GISSEDAKKV TKLIRDEGPK 

       130        140        150        160 
GVKAQIQGEE IRVSSKKRDD LQAVQALLRG ADLDFAVQFV NYR

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PYR-GCK.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000656 Genomic DNA. Translation: ABP47712.1.
RefSeqYP_001136500.1. NC_009338.1.

3D structure databases

ProteinModelPortalA4T197.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4T197.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000024115; EBMYCP00000023777; EBMYCG00000024110.
GeneID4976558.
GenomeReviewsGene locus Mflv_5248 in contig CP000656_GR.
KEGGmgi:Mflv_5248.
PATRIC18038798. VBIMycGil17082_5361.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1666.
GeneTreeEBGT00050000017546.
HOGENOMHBG290634.
OMALQFTNYR.
PhylomeDBA4T197.
ProtClustDBPRK05412.

Enzyme and pathway databases

BioCycMGIL350054:MFLV_5248-MONOMER.

Family and domain databases

HAMAPMF_00632. UPF0234.
[Tree]
InterProIPR007551. DUF520.
[Graphical view]
KOK09767.
PfamPF04461. DUF520. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY5248_MYCGI
AccessionPrimary (citable) accession number: A4T197
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 15, 2007
Last modified: January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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