Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4SV60 (A4SV60_POLSQ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.3.3.3 EMBL ABP33374.1
Gene names
Ordered Locus Names:Pnuc_0153
OrganismPolynucleobacter sp. (strain QLW-P1DMWA-1) [Complete proteome] [HAMAP] EMBL ABP33374.1
Taxonomic identifier312153 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaePolynucleobacter

Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLigase EMBL ABP33374.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbiotin biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

dethiobiotin synthase activity

Inferred from electronic annotation. Source: EC

magnesium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4SV60 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: A3A9342ED169A972

FASTA23825,607
        10         20         30         40         50         60 
MNTSSSFFVT GTDTEIGKTL VSGALILKLR EQNKHVVGFK PVVAGTYLEA NGKLLNEDLE 

        70         80         90        100        110        120 
TLRIASHLSP EELNLCPYVL DTPAAPHIAA AQLGLQLNLA TIIKAYELIR AQAESVVVEG 

       130        140        150        160        170        180 
AGGFLIPLNT TEDLSDFAAQ INLPVILVVG MRLGCINHAL LTVEAIESRK LKIAGWIANS 

       190        200        210        220        230 
LSSKMDLLED NIQALQTRIH APFLGLIPTL PSEIEKPNNA PYTLAALQFA AEHIQLPS 

« Hide

References

[1]"Complete sequence of Polynucleobacter sp. QLW-P1DMWA-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Poeckl M., Wu Q.L., Hahn M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: QLW-P1DMWA-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000655 Genomic DNA. Translation: ABP33374.1.
RefSeqYP_001154938.1. NC_009379.1.

3D structure databases

ProteinModelPortalA4SV60.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4SV60.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5053738.
GenomeReviewsGene locus Pnuc_0153 in contig CP000655_GR.
KEGGpnu:Pnuc_0153.
PATRIC22964653. VBIPolNec12025_0159.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0132.
HOGENOMHBG650065.
OMAANCVDPN.
PhylomeDBA4SV60.

Enzyme and pathway databases

BioCycPSP312153:PNUC_0153-MONOMER.

Family and domain databases

HAMAPMF_00336. BioD.
[Tree]
InterProIPR002586. CbiA_P_synth.
IPR004472. DTB_synth_BioD.
[Graphical view]
KOK01935.
PfamPF01656. CbiA. 1 hit.
[Graphical view]
PIRSFPIRSF006755. DTB_synth. 1 hit.
TIGRFAMsTIGR00347. BioD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4SV60_POLSQ
AccessionPrimary (citable) accession number: A4SV60
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)