A4SV28 (A4SV28_POLSQ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
TPR repeat-containing protein EMBL ABP33342.1

Gene names

Ordered Locus Names:

Pnuc_0121

Organism

Polynucleobacter sp. (strain QLW-P1DMWA-1) [Complete proteome] [HAMAP] EMBL ABP33342.1

Taxonomic identifier

312153 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Polynucleobacter

Protein attributes

Sequence length	732 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4SV28 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: AFEBB47112FC21ED	FASTA	732	82,463
	10 20 30 40 50 60 MSSPQTIQLL QKAVQEIQAN ELESAKLHLK AVLSKERSQP DALRFLGIIA GLQKDWTQAL 70 80 90 100 110 120 ELIDQAIAVS PENGLAYSNR GNVLSELKRH EEALTCYEKA ISLQPDYAEA YSNQGNALQA 130 140 150 160 170 180 LGRFEEALIC YEKAISLQPD YAEAYSNQGN AFLALSRYQA ALACYEKTVL LDANNAKAFY 190 200 210 220 230 240 GAAIIFDLQK KYDYSLGCCN QALKIQPHYL EALALRGTIY FRAKDYEQAL TNFDEILLIH 250 260 270 280 290 300 PQSIQAWLSK GDIYAETKQF EKADEAFKKA LVIDPTKDFL FGLSIQNQIQ MCQWTDLTNQ 310 320 330 340 350 360 VKDLVHRVRD GEKVAIPYNL ISLVDDKSLI RCSIEIYAQA MRGNIERVKQ EKISPKKKIR 370 380 390 400 410 420 LGYFSADFHN HPTAYLVAEL FECHDKEKFE LFGFVFGRNA PDEMRNRLEK SFDQFLDVED 430 440 450 460 470 480 RSDEEIAQLA REMHIDIAID LKGFTKEARP KIFMYGAAPI QISYLAFPGT MGLPCFDYVI 490 500 510 520 530 540 ADPILIPEKH QDGMVEKIIY MPDSYQVNDR SRKISPLIKS RKELGLPESG FVFCCFNNNY 550 560 570 580 590 600 KITPAVLDGW VKILLAVEGS VLWLYEDNPI AVANLKQEAL TRGLDAGRFI FAGRMDSADH 610 620 630 640 650 660 LARYKNANLF LDTTPCNAHT TASDALWAGL PVLTLAGESF GARVAASLNN AVGLSGLTVE 670 680 690 700 710 720 TQEEYEALAI QLATSPSRLK ELKDRLERNL LTAPLFDTPL FTKNLEAGYI EAYERHQQNM 730 PLDHIYIDAP KG

References

[1]

"Complete sequence of Polynucleobacter sp. QLW-P1DMWA-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Poeckl M., Wu Q.L., Hahn M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: QLW-P1DMWA-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000655 Genomic DNA. Translation: ABP33342.1.
RefSeq	YP_001154906.1. NC_009379.1.
3D structure databases
ProteinModelPortal	A4SV28.
ModBase	Search...
Protein-protein interaction databases
STRING	A4SV28.
Protein family/group databases
CAZy	GT41. Glycosyltransferase Family 41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5053211.
GenomeReviews	Gene locus Pnuc_0121 in contig CP000655_GR.
KEGG	pnu:Pnuc_0121.
PATRIC	22964583. VBIPolNec12025_0125.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3914.
HOGENOM	HBG684498.
OMA	DYLFGDP.
ProtClustDB	CLSK736320.
Enzyme and pathway databases
BioCyc	PSP312153:PNUC_0121-MONOMER.
Family and domain databases
InterPro	IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 2 hits.
Pfam	PF00515. TPR_1. 4 hits. [Graphical view]
SMART	SM00028. TPR. 7 hits. [Graphical view]
PROSITE	PS50005. TPR. 7 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4SV28_POLSQ

Accession

Primary (citable) accession number: A4SV28

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)