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A4SRA2

- A4SRA2_AERS4

UniProt

A4SRA2 - A4SRA2_AERS4

Protein

Alpha-amylase

Gene

amyA

Organism
Aeromonas salmonicida (strain A449)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (15 May 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciASAL382245:GJJN-3442-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:amyAImported
    Ordered Locus Names:ASA_3455Imported
    OrganismiAeromonas salmonicida (strain A449)Imported
    Taxonomic identifieri382245 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
    ProteomesiUP000000225: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi382245.ASA_3455.

    Structurei

    3D structure databases

    ProteinModelPortaliA4SRA2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000272352.
    KOiK01176.
    OMAiVRFNDQT.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    2.60.40.670. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR022409. PKD/Chitinase_dom.
    IPR000601. PKD_dom.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00801. PKD. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM00089. PKD. 1 hit.
    [Graphical view]
    SUPFAMiSSF49299. SSF49299. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS50093. PKD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4SRA2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MHNTLFQTAM LTAVLSSFSH TATAEGVMVH LFQWKFNDIA NECENVLGPK    50
    GFGSVQITPP AEHKQGSQVW WTVYQPVSFK NFNSHGGNEA ELKSMIARCN 100
    AAGVKIYADA VFNQLASGTG TATGGGSYNS GQYQYPQFGY NDFHHSGDIT 150
    NYGDSNNVWN GALYGMPDLK TESPYVQDQI ATYMKTLLGW GVAGFRVDAA 200
    KHMAPADVKA ILVKAGSPKA YLEVIGAGGE SAEIQPNRYT HIDTVTEFKY 250
    GTDLAANFNG KIKNLKTLGE SWGLLPSDKS FIFVVNHDRE RGHGGGGMLT 300
    FMNGARYELA NVFMMAWPYG WKQVMSGYRF ENMGTYETDK GAPGSTPCSD 350
    TQWNCEQRRP QIMNMAMFHN QTKDLPVNNW WDNGNNQIAF SRGNKGFVAI 400
    NNESGNLVAS VQTGLPAGEY CNILSGNDYC SGAYIKVDGS GKAGLNLAGM 450
    KAAAILASCT KAAPCGGVIP GNRFSSLNLR GTHNAWGNTA MQVDDNRIWS 500
    AIINFTGAGD TSGAQRFKFD VFGNWTENYG DNEGDGIADK GRTRDIYFNG 550
    AGQYRIALKE SDLSYTVTAL SNNQAPVAVI SPKKPSVKLG ESLVFDASGS 600
    TDDAGVASYS WSTGGIGKTE TVQFDTLGSR TVTVTVTDTE GLTASVSATV 650
    HVTDGSGAYT SELPTLHFRG TPNGWGVLAM TLVADNQWEA RVTFDGQTNQ 700
    RFKFDVKGDW SQNYGDTNKD GVAELTGADI TTPVVGAYVV RFNDQTLTYS 750
    LNAQ 754
    Length:754
    Mass (Da):81,391
    Last modified:May 15, 2007 - v1
    Checksum:i53C2E21F9A0FA89E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000644 Genomic DNA. Translation: ABO91424.1.
    RefSeqiWP_005318926.1. NC_009348.1.
    YP_001143172.1. NC_009348.1.

    Genome annotation databases

    EnsemblBacteriaiABO91424; ABO91424; ASA_3455.
    GeneIDi4996881.
    KEGGiasa:ASA_3455.
    PATRICi20793368. VBIAerSal2987_3445.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000644 Genomic DNA. Translation: ABO91424.1 .
    RefSeqi WP_005318926.1. NC_009348.1.
    YP_001143172.1. NC_009348.1.

    3D structure databases

    ProteinModelPortali A4SRA2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 382245.ASA_3455.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABO91424 ; ABO91424 ; ASA_3455 .
    GeneIDi 4996881.
    KEGGi asa:ASA_3455.
    PATRICi 20793368. VBIAerSal2987_3445.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000272352.
    KOi K01176.
    OMAi VRFNDQT.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci ASAL382245:GJJN-3442-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    2.60.40.670. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR022409. PKD/Chitinase_dom.
    IPR000601. PKD_dom.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00801. PKD. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM00089. PKD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49299. SSF49299. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS50093. PKD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen."
      Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L.
      BMC Genomics 9:427-427(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: A449Imported.

    Entry informationi

    Entry nameiA4SRA2_AERS4
    AccessioniPrimary (citable) accession number: A4SRA2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 15, 2007
    Last sequence update: May 15, 2007
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3