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Protein

Alpha-amylase

Gene

amyA

Organism
Aeromonas salmonicida (strain A449)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciASAL382245:GJJN-3442-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyAImported
Ordered Locus Names:ASA_3455Imported
OrganismiAeromonas salmonicida (strain A449)Imported
Taxonomic identifieri382245 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000000225 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi382245.ASA_3455.

Structurei

3D structure databases

ProteinModelPortaliA4SRA2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000272352.
KOiK01176.
OMAiVRFNDQT.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
2.60.40.670. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00801. PKD. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM00089. PKD. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50093. PKD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4SRA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHNTLFQTAM LTAVLSSFSH TATAEGVMVH LFQWKFNDIA NECENVLGPK
60 70 80 90 100
GFGSVQITPP AEHKQGSQVW WTVYQPVSFK NFNSHGGNEA ELKSMIARCN
110 120 130 140 150
AAGVKIYADA VFNQLASGTG TATGGGSYNS GQYQYPQFGY NDFHHSGDIT
160 170 180 190 200
NYGDSNNVWN GALYGMPDLK TESPYVQDQI ATYMKTLLGW GVAGFRVDAA
210 220 230 240 250
KHMAPADVKA ILVKAGSPKA YLEVIGAGGE SAEIQPNRYT HIDTVTEFKY
260 270 280 290 300
GTDLAANFNG KIKNLKTLGE SWGLLPSDKS FIFVVNHDRE RGHGGGGMLT
310 320 330 340 350
FMNGARYELA NVFMMAWPYG WKQVMSGYRF ENMGTYETDK GAPGSTPCSD
360 370 380 390 400
TQWNCEQRRP QIMNMAMFHN QTKDLPVNNW WDNGNNQIAF SRGNKGFVAI
410 420 430 440 450
NNESGNLVAS VQTGLPAGEY CNILSGNDYC SGAYIKVDGS GKAGLNLAGM
460 470 480 490 500
KAAAILASCT KAAPCGGVIP GNRFSSLNLR GTHNAWGNTA MQVDDNRIWS
510 520 530 540 550
AIINFTGAGD TSGAQRFKFD VFGNWTENYG DNEGDGIADK GRTRDIYFNG
560 570 580 590 600
AGQYRIALKE SDLSYTVTAL SNNQAPVAVI SPKKPSVKLG ESLVFDASGS
610 620 630 640 650
TDDAGVASYS WSTGGIGKTE TVQFDTLGSR TVTVTVTDTE GLTASVSATV
660 670 680 690 700
HVTDGSGAYT SELPTLHFRG TPNGWGVLAM TLVADNQWEA RVTFDGQTNQ
710 720 730 740 750
RFKFDVKGDW SQNYGDTNKD GVAELTGADI TTPVVGAYVV RFNDQTLTYS

LNAQ
Length:754
Mass (Da):81,391
Last modified:May 15, 2007 - v1
Checksum:i53C2E21F9A0FA89E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO91424.1.
RefSeqiWP_005318926.1. NC_009348.1.
YP_001143172.1. NC_009348.1.

Genome annotation databases

EnsemblBacteriaiABO91424; ABO91424; ASA_3455.
GeneIDi4996881.
KEGGiasa:ASA_3455.
PATRICi20793368. VBIAerSal2987_3445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO91424.1.
RefSeqiWP_005318926.1. NC_009348.1.
YP_001143172.1. NC_009348.1.

3D structure databases

ProteinModelPortaliA4SRA2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi382245.ASA_3455.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO91424; ABO91424; ASA_3455.
GeneIDi4996881.
KEGGiasa:ASA_3455.
PATRICi20793368. VBIAerSal2987_3445.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000272352.
KOiK01176.
OMAiVRFNDQT.
OrthoDBiEOG6RZB1B.

Enzyme and pathway databases

BioCyciASAL382245:GJJN-3442-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
2.60.40.670. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00801. PKD. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM00089. PKD. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50093. PKD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen."
    Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L.
    BMC Genomics 9:427-427(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A449Imported.

Entry informationi

Entry nameiA4SRA2_AERS4
AccessioniPrimary (citable) accession number: A4SRA2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 27, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.