A4SNH1 (A4SNH1_AERS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520 RuleBase RU003455
EC=2.7.1.16 HAMAP MF_00520 RuleBase RU003455

Gene names

Name:	araB HAMAP MF_00520 EMBL ABO90443.1
Ordered Locus Names:	ASA_2397

Organism

Aeromonas salmonicida (strain A449) [Complete proteome] [HAMAP]

Taxonomic identifier

382245 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length	563 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520 RuleBase RU003455

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 EMBL ABO90443.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4SNH1 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: ABC267CFCB2F33E4	FASTA	563	60,958
	10 20 30 40 50 60 MSEHPRSEHI VIGLDFGSDS VRALAVRCHD GAELATHVVY YPRWQAGHYC QPVTNQFRHH 70 80 90 100 110 120 PLDYLESMEQ AVVQVVGQLS PAQRAAVRGI GVDSTGSTPA PIDEEGRVLA LRPEFADNPN 130 140 150 160 170 180 AMFVLWKDHT AIEEAEAITA LCHGGQFPEY SRYIGGIYSS EWFWAKILHV SRSDAAVRAA 190 200 210 220 230 240 ACNWVELCDW VPAILSGTQA PANIKRGRCS AGHKSLWHPS WGGLPAADSL NALDPLLTRD 250 260 270 280 290 300 LDFPLFTDSW TADLPVGTLT PEWAERLHLS CEVVIAGGAF DCHMGAVGAG AGNNALVKVI 310 320 330 340 350 360 GTSTCDILIA DEATIGDRAI AGICGQVDGS VVPGRVGLEA GQSAFGDIYA WYQRQLSWPL 370 380 390 400 410 420 DRLAAQYPEL YTAIEAHKQQ LLPSLAAAWD QQRDLAHLPV VLDWFNGRRT PYANQRLQGT 430 440 450 460 470 480 VTGLNLGTDA PDLFGALVAS TAFGARSIME CMTSQQVPVD QVIALGGIAR KSTTVMQTCA 490 500 510 520 530 540 DVMNRPIQVV ASDQCCALGA AIFAAVAAGI YADVADAQRD MASAVERTHQ PHPERVAEYE 550 560 RLYQRYLQWS HAAEPLYNQG ALA

References

[1]

"The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen." Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L. BMC Genomics 9:427-427(2008) [PubMed: 18801193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000644 Genomic DNA. Translation: ABO90443.1.
RefSeq	YP_001142191.1. NC_009348.1.
3D structure databases
ProteinModelPortal	A4SNH1.
ModBase	Search...
Protein-protein interaction databases
STRING	A4SNH1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4995098.
GenomeReviews	Gene locus ASA_2397 in contig CP000644_GR.
KEGG	asa:ASA_2397.
PATRIC	20791150. VBIAerSal2987_2359.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1069.
HOGENOM	HBG312681.
OMA	NGRRTPD.
PhylomeDB	A4SNH1.
ProtClustDB	PRK04123.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4SNH1_AERS4

Accession

Primary (citable) accession number: A4SNH1

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)