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Protein

Glycerol-3-phosphate dehydrogenase

Gene

glpB

Organism
Aeromonas salmonicida (strain A449)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.SAAS annotation

Cofactori

FMNSAAS annotation

Pathwayi: glycerol degradation via glycerol kinase pathway

This protein is involved in step 1 of the subpathway that synthesizes glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route).SAAS annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Glycerol-3-phosphate dehydrogenase (glpB)
This subpathway is part of the pathway glycerol degradation via glycerol kinase pathway, which is itself part of Polyol metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route), the pathway glycerol degradation via glycerol kinase pathway and in Polyol metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseSAAS annotation

Keywords - Ligandi

Flavoprotein, FMNSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenaseSAAS annotation (EC:1.1.5.3SAAS annotation)
Gene namesi
Name:glpBImported
Ordered Locus Names:ASA_2319Imported
OrganismiAeromonas salmonicida (strain A449)Imported
Taxonomic identifieri382245 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
Proteomesi
  • UP000000225 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi382245.ASA_2319.

Structurei

3D structure databases

ProteinModelPortaliA4SN96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 409FAD_binding_2InterPro annotationAdd BLAST406

Sequence similaritiesi

Belongs to the anaerobic G-3-P dehydrogenase subunit B family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108KJ0. Bacteria.
COG3075. LUCA.
HOGENOMiHOG000278489.
KOiK00112.
OMAiVAINAQC.

Family and domain databases

Gene3Di3.50.50.60. 2 hits.
InterProiIPR003953. FAD-binding_2.
IPR023753. FAD/NAD-binding_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
SUPFAMiSSF51905. SSF51905. 3 hits.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

A4SN96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFDSIVIGG GMAGLSAALR LAEAGQKTLL MASGQSALHF SSGSIDLLES
60 70 80 90 100
EGDPRAALPA FMAEHPDHPY SKVGLTNIEA SLADLQRHCH EQGLPLFRQE
110 120 130 140 150
TNHQRLTPIG TLKSTWLSPH TCACQTDAPA PDAILLATLE GFRDFHPALA
160 170 180 190 200
AANLATHPRF AHCRIMTGEI RLPQLAEFSR NPHEFRSADI ARLFDKQKGD
210 220 230 240 250
QPDLLADLAR EICRMVHESS DPGCRHVVLP ACLSLGLVGP RLAELEKRTG
260 270 280 290 300
CTIKEVATMP PSLIGMRMQE ALKRRFQALG GTFLTSERVL GARYEGDKVL
310 320 330 340 350
GVHSQNGDDQ LFEADHFVLA SGSFFSRGLE SRLRGIREPI FNADVLSLEE
360 370 380 390 400
RDAWAGRRLF DHHPFMGFGV KTDDKLRVMR GGKPLTNLYG AGSVLAHYDP
410 420
IKEGSGSGVA VATGWQAAGH ILGAAQ
Length:426
Mass (Da):46,246
Last modified:May 15, 2007 - v1
Checksum:i1E9D53CF771C3F91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO90368.1.
RefSeqiWP_005310964.1. NC_009348.1.

Genome annotation databases

EnsemblBacteriaiABO90368; ABO90368; ASA_2319.
GeneIDi4997364.
KEGGiasa:ASA_2319.
PATRICi20790978. VBIAerSal2987_2273.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO90368.1.
RefSeqiWP_005310964.1. NC_009348.1.

3D structure databases

ProteinModelPortaliA4SN96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi382245.ASA_2319.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO90368; ABO90368; ASA_2319.
GeneIDi4997364.
KEGGiasa:ASA_2319.
PATRICi20790978. VBIAerSal2987_2273.

Phylogenomic databases

eggNOGiENOG4108KJ0. Bacteria.
COG3075. LUCA.
HOGENOMiHOG000278489.
KOiK00112.
OMAiVAINAQC.

Enzyme and pathway databases

UniPathwayiUPA00618; UER00673.

Family and domain databases

Gene3Di3.50.50.60. 2 hits.
InterProiIPR003953. FAD-binding_2.
IPR023753. FAD/NAD-binding_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
SUPFAMiSSF51905. SSF51905. 3 hits.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA4SN96_AERS4
AccessioniPrimary (citable) accession number: A4SN96
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: November 30, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.