Reviewed, UniProtKB/Swiss-Prot A4SLF3 (RPIA_AERS4)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	ASA_1642

Organism

Aeromonas salmonicida (strain A449) [Complete proteome] [HAMAP]

Taxonomic identifier

382245 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length	217 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 217	217	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016897

Sequences

	Sequence		Length	Mass (Da)
	A4SLF3-1 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 0A8F825C0EB89449	FASTA	217	23,010
	10 20 30 40 50 60 MTQDEMKKAA GWAALKYVVP GTIVGVGTGS TVNHFIDALA TMKDQINGAV SSSIASTERL 70 80 90 100 110 120 KEFGINVYDL NDIDALSVYV DGADEINASR DMIKGGGAAL TREKIVAAVA DKFICIIDNT 130 140 150 160 170 180 KTVDVLGQFP LPVEVIPMAR EYVAREIRKL GGNPEWREGV VTDNGNIILD VKGMAIKDAK 190 200 210 ALEVQLNGIV GVVTNGLFAH RGADVVLIGT PDGVITQ

References

[1]

"The genome sequence of Aeromonas salmonicida subsp. salmonicida A449." Reith M.E., Singh R.K., Curtis B., Boyd J., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J., Johnson S., Brown L. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000644 Genomic DNA. Translation: ABO89725.1.
RefSeq	YP_001141473.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4SLF3.
Genome annotation databases
GeneID	4998896.
GenomeReviews	Gene locus ASA_1642 in contig CP000644_GR.
KEGG	asa:ASA_1642.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	ADKFICI.
Family and domain databases
HAMAP	MF_00170. [Tree]
InterPro	IPR004788. RpiA. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
ProDom	PD005813. RpiA. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_AERS4

Accession

Primary (citable) accession number: A4SLF3

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	May 15, 2007
Last modified:	November 3, 2009
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)