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A4SK67 (A4SK67_AERS4) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL ABO89289.1
Ordered Locus Names:ASA_1179
OrganismAeromonas salmonicida (strain A449) [Complete proteome] [HAMAP]
Taxonomic identifier382245 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
A4SK67 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 64D93FFF23B9A9B0

FASTA28431,089
        10         20         30         40         50         60 
MEQKNIKIND IDVANDKPFV LFGGMNVLES RDMAMAVCEK YVEVTSKLGI PFVFKASWDK 

        70         80         90        100        110        120 
ANRSSIHSYR GPGLEEGMKI FQELKATFGM PVISDLHEVH QAKPVAEVVD VIQLPAFLAR 

       130        140        150        160        170        180 
QTDLVEAMAR TGNVINIKKP QFLSPSQMKN ITDKFEECGN DQLILCERGA NFGYDNLVVD 

       190        200        210        220        230        240 
MLGLGVMKKS TGGYPVIFDV THSLQCRDPL GAASGGRRDQ VTELARAGMA VGLAGLFIES 

       250        260        270        280 
HPDPKVARCD GPSALPLDKL EGFLKQMKAI DDLIKGFEPL DTSA

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References

[1]"The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen."
Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L.
BMC Genomics 9:427-427(2008) [PubMed: 18801193] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000644 Genomic DNA. Translation: ABO89289.1.
RefSeqYP_001141037.1. NC_009348.1.

3D structure databases

ProteinModelPortalA4SK67.
SMRA4SK67. Positions 1-283.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4SK67.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4994839.
GenomeReviewsGene locus ASA_1179 in contig CP000644_GR.
KEGGasa:ASA_1179.
PATRIC20788726. VBIAerSal2987_1171.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAQLILCDR.
PhylomeDBA4SK67.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4SK67_AERS4
AccessionPrimary (citable) accession number: A4SK67
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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