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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

ASA_0823

Organism
Aeromonas salmonicida (strain A449)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciASAL382245:GJJN-819-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:ASA_0823Imported
OrganismiAeromonas salmonicida (strain A449)Imported
Taxonomic identifieri382245 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000000225: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi382245.ASA_0823.

Structurei

3D structure databases

ProteinModelPortaliA4SJA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A4SJA0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTPWQPGLEN LMKLTELFAL PDPAFGQAMT ALLETFHHSD DSQAPYQHDH
60 70 80 90 100
FTHQLDQSRM PTVGISMDNY LARLATLVPG ASHLTSPRYM GHMTAPLPAF
110 120 130 140 150
TAELSRLLVM LNQNPMKMES SRLLSFLERE VLAKLHRLIY RADDAFYSEQ
160 170 180 190 200
MHAKDAALGV MTSGGTIANV TALWLARNRA CGDNLFALYE QGYRGAVILG
210 220 230 240 250
SRLMHYSFDK GMDLLGLGAH SVWRLATDDQ NRLDMAELEQ ALIQCKEQKL
260 270 280 290 300
KVLALVGVAG STDFGSIDPL PELAAIAARE QIHFHVDAAW GGPTLFSPRY
310 320 330 340 350
QGLLAGIELA DTVTLDGHKQ LLVPLGTGML LCRQPDLMMT VKREAPYAIR
360 370 380 390 400
ASSFDQGRFT LEGTRPANAL YLDAAFQLFG QQGYARLIEA NYDRARLMAD
410 420 430 440 450
LINKDPAFEL MSAPVMNLLS YRCIPPHLQG KALDEAANDQ INQFNVALQK
460 470 480 490 500
AQRAEGHSFV SRTQRAVGRY GAQPLTLLRA VLLNPLIEEP HIRELLADQQ
510 520
RLGADIARQL FGQASGRELD AK
Length:522
Mass (Da):57,830
Last modified:May 15, 2007 - v1
Checksum:i447C033C56D12164
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO88972.1.
RefSeqiWP_011898385.1. NC_009348.1.
YP_001140720.1. NC_009348.1.

Genome annotation databases

EnsemblBacteriaiABO88972; ABO88972; ASA_0823.
GeneIDi4998254.
KEGGiasa:ASA_0823.
PATRICi20787982. VBIAerSal2987_0821.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000644 Genomic DNA. Translation: ABO88972.1.
RefSeqiWP_011898385.1. NC_009348.1.
YP_001140720.1. NC_009348.1.

3D structure databases

ProteinModelPortaliA4SJA0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi382245.ASA_0823.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO88972; ABO88972; ASA_0823.
GeneIDi4998254.
KEGGiasa:ASA_0823.
PATRICi20787982. VBIAerSal2987_0821.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciASAL382245:GJJN-819-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen."
    Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L.
    BMC Genomics 9:427-427(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A449Imported.

Entry informationi

Entry nameiA4SJA0_AERS4
AccessioniPrimary (citable) accession number: A4SJA0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: February 4, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.