A4SDH3 (A4SDH3_PROVI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exonuclease RecJ EMBL ABP36532.1
EC=3.1.-.- EMBL ABP36532.1

Gene names

Ordered Locus Names:

Cvib_0510 EMBL ABP36532.1

Organism

Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides (strain DSM 265)) [Complete proteome] [HAMAP] EMBL ABP36532.1

Taxonomic identifier

290318 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium › Chlorobium phaeovibrioides

Protein attributes

Sequence length	574 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Exonuclease EMBL ABP36532.1 Hydrolase Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	5'-3' exonuclease activity Inferred from electronic annotation. Source: InterPro manganese ion binding Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4SDH3 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 4FB14713C165AE34	FASTA	574	63,981
	10 20 30 40 50 60 MKRYRWNLPP VDDAALTSFA CSIKASLPLA RIFFMRGVKS YDAAEAFFTA SLETLPSPSL 70 80 90 100 110 120 FASMPKAVGR VQEAIRSGEK IMIYGDYDVD GITGTAMLNL FLRDRDADVS YYINNRFEEG 130 140 150 160 170 180 YGLSMEGIRA AAERQVGLII TVDCGISANL AIERAGELGM DVIVCDHHEP EELPDAYAIL 190 200 210 220 230 240 NPKVPGCSYP FRELCGCGVA FRFVQAIAEE LQLSAESWQQ YLDLVAIATA ADMVVLSEEN 250 260 270 280 290 300 RTMVREGFRM MQQRPRVGIE AMLSFMKVNP RDLGMTGVTF GIAPRINAAG RMGSARKAVD 310 320 330 340 350 360 WLLAESKDEA HKHTGELEEL NILRRRTDLE MLKRAEEMVE GHFASYCSSI VLYDESWHLG 370 380 390 400 410 420 VVGIVASKML ERYHLPTVIL GASKELVKGS VRSVPGLNIY SVLQECSDLL EQFGGHHQAA 430 440 450 460 470 480 GVSMRPENLP AFRKRFDEIS ARVLDMDARQ KELTVDTELG LGEITGNFMK ALQRFSPYGV 490 500 510 520 530 540 GNPEPLFLTE GLQCTGSVRL LKERHVKFMV RDASGKRLDV IAFDRKDIYD ALMESSGQSF 550 560 570 SMVYSLELHE WNGRVEPQAK VKDLSVESLH RQGL

References

[1]

"Complete sequence of Prosthecochloris vibrioformis DSM 265." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Schuster S.C., Bryant D.A., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 265 EMBL ABP36532.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000607 Genomic DNA. Translation: ABP36532.1.
RefSeq	YP_001130034.1. NC_009337.1.
3D structure databases
ProteinModelPortal	A4SDH3.
ModBase	Search...
Protein-protein interaction databases
STRING	290318.Cvib_0510.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP36532; ABP36532; Cvib_0510.
GeneID	4970332.
KEGG	pvi:Cvib_0510.
PATRIC	21395372. VBIChlPha132153_0538.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0608.
HOGENOM	HOG000018413.
KO	K07462.
OMA	PTREHFK.
ProtClustDB	CLSK637302.
Enzyme and pathway databases
BioCyc	CPHA290318:GHNQ-561-MONOMER.
Family and domain databases
InterPro	IPR003156. Pesterase_DHHA1. IPR001667. Pesterase_RecJ. IPR004610. RecJ. [Graphical view]
Pfam	PF01368. DHH. 1 hit. PF02272. DHHA1. 1 hit. [Graphical view]
TIGRFAMs	TIGR00644. recJ. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4SDH3_PROVI

Accession

Primary (citable) accession number: A4SDH3

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)