Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4SCK6 (A4SCK6_PROVI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 3 domain protein EMBL ABP36215.1
Gene names
Ordered Locus Names:Cvib_0192
OrganismProsthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides (strain DSM 265)) [Complete proteome] [HAMAP]
Taxonomic identifier290318 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length595 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABP36215.1
   Molecular functionHydrolase EMBL ABP36215.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL ABP36215.1
Chain25 – 595571 Potential EMBL ABP36215.1
PRO_5000235168

Sequences

Sequence LengthMass (Da)Tools
A4SCK6 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 75055627D4D1C4A1

FASTA59563,969
        10         20         30         40         50         60 
MKRLVQKTYA TLIAAIVTFP AIAAPPFKAM AEHLPWRAEE IFTPADSLLL RELNEMPLSM 

        70         80         90        100        110        120 
KIGQMLIADS PGGFETDNTP QQEKLESLVR SGTIGGVMFL KGGMFKTAML ANHLQSIAPK 

       130        140        150        160        170        180 
PLLLSADMEN GAAMRLEGAT EFPPAMAIAA TQRPRLAAAM GAAIAAEAKA VGIRQNYAPV 

       190        200        210        220        230        240 
GDLNSNQMNP VINTRSFGDR PETAVRMTGA YIEGLQRGGL IATIKHFPGH GDVHVDSHLA 

       250        260        270        280        290        300 
LPVLSAPKEH LQQYELEPFR AAIGQGVMSV MVGHLAVPAI TGTMTPATLS PEIITGLLRQ 

       310        320        330        340        350        360 
ELGFKGLIIT DALNMKALYN GSNIPGISVR AVLAGNDLLL FSPDPALTHR SLLEAVKSGL 

       370        380        390        400        410        420 
ITEERINQSV LRIMQAKRWL KLQQSRMVNL NHVPALSSPH SHRALASELS RRSITIAKES 

       430        440        450        460        470        480 
GSIPLQLSSP APVLHLILSD SGIAHPAEAF SQEIDRHWHA THVQCNPKTN PATYRQAEAL 

       490        500        510        520        530        540 
ADSAAAIIIS STLGRLPGPG SRHLTQSQQK FISQLAEKHQ ATKPLVFIAL GTPYILNIFP 

       550        560        570        580        590 
EINNSICTFS TGEESQRNAV GVLLGKQKAE GKLPIALNIT NNPQEPSGHG QDNSR

« Hide

References

[1]"Complete sequence of Prosthecochloris vibrioformis DSM 265."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Schuster S.C., Bryant D.A., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 265.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000607 Genomic DNA. Translation: ABP36215.1.
RefSeqYP_001129717.1. NC_009337.1.

3D structure databases

ProteinModelPortalA4SCK6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4SCK6.

Protein family/group databases

CAZyGH3. Glycoside Hydrolase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4969664.
GenomeReviewsGene locus Cvib_0192 in contig CP000607_GR.
KEGGpvi:Cvib_0192.
PATRIC21394708. VBIChlPha132153_0210.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1472.
HOGENOMHBG617255.
OMAMSVMVGH.
ProtClustDBCLSK638099.

Family and domain databases

InterProIPR019800. Glyco_hydro_3_AS.
IPR002772. Glyco_hydro_3_C.
IPR001764. Glyco_hydro_3_N.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.40.50.1700. G3DSA:3.40.50.1700. 1 hit.
G3DSA:3.20.20.300. Glyco_hydro_3_N. 1 hit.
KOK01207.
PfamPF00933. Glyco_hydro_3. 1 hit.
PF01915. Glyco_hydro_3_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00775. GLYCOSYL_HYDROL_F3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4SCK6_PROVI
AccessionPrimary (citable) accession number: A4SCK6
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info