A4SA21 (A4SA21_OSTLU) Unreviewed, UniProtKB/TrEMBL
Last modified
April 3, 2013.
Version 45.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Ribulose bisphosphate carboxylase small chain RuleBase RU003627 EC=4.1.1.39 RuleBase RU003627 | ||
| Gene names |
| ||
| Organism | Ostreococcus lucimarinus (strain CCE9901) [Complete proteome] | ||
| Taxonomic identifier | 436017 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus › ![]() |
Protein attributes
| Sequence length | 134 AA. |
| Sequence status | Fragment. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS000894 |
| Catalytic activity | 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. RuleBase RU003627 SAAS SAAS000894 3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. RuleBase RU003627 SAAS SAAS000894 |
| Subunit structure | 8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS000894 |
| Sequence similarities | Belongs to the RuBisCO small chain family. RuleBase RU003627 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbon dioxide fixation RuleBase RU003627 SAAS SAAS000894 Photorespiration RuleBase RU003627 Photosynthesis RuleBase RU003627 SAAS SAAS000894 |
| Cellular component | Plastid RuleBase RU003627 |
| Molecular function | Lyase RuleBase RU003627 SAAS SAAS000894 Monooxygenase RuleBase RU003627 SAAS SAAS000894 Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | carbon fixation Inferred from electronic annotation. Source: UniProtKB-KW photorespirationInferred from electronic annotation. Source: UniProtKB-KW photosynthesisInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | plastid Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular_function | monooxygenase activity Inferred from electronic annotation. Source: UniProtKB-KW ribulose-bisphosphate carboxylase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Experimental info | ||||||||
|---|---|---|---|---|---|---|---|---|
| Non-terminal residue | 1 | 1 | EMBL ABP00588.1 | |||||
Sequences
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References
| [1] | "The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. Grigoriev I.V.Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCE9901. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000597 Genomic DNA. Translation: ABP00588.1. |
| RefSeq | XP_001422271.1. XM_001422234.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 436017.A4SA21. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 5006223. |
| KEGG | olu:OSTLU_42060. |
Phylogenomic databases | |
| eggNOG | COG4451. |
| HOGENOM | HOG000141332. |
| KO | K01602. |
| OMA | ERASTYY. |
Family and domain databases | |
| Gene3D | 3.30.190.10. 1 hit. |
| InterPro | IPR024681. RuBisCO_sc. IPR000894. RuBisCO_sc_dom. [Graphical view] |
| Pfam | PF00101. RuBisCO_small. 1 hit. [Graphical view] |
| PRINTS | PR00152. RUBISCOSMALL. |
| SMART | SM00961. RuBisCO_small. 1 hit. [Graphical view] |
| SUPFAM | SSF55239. RuBisCO_small. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | A4SA21_OSTLU | ||||||||
| Accession | Primary (citable) accession number: A4SA21 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
