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A4S4Q6

- A4S4Q6_OSTLU

UniProt

A4S4Q6 - A4S4Q6_OSTLU

Protein
Submitted name:

Predicted protein

Gene

OSTLU_26493

Organism
Ostreococcus lucimarinus (strain CCE9901)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (15 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:OSTLU_26493Imported
    OrganismiOstreococcus lucimarinus (strain CCE9901)Imported
    Taxonomic identifieri436017 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesOstreococcus
    ProteomesiUP000001568: Chromosome 11

    Interactioni

    Protein-protein interaction databases

    STRINGi436017.A4S4Q6.

    Structurei

    3D structure databases

    ProteinModelPortaliA4S4Q6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000265334.
    KOiK10777.
    OMAiCESREQK.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProiIPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4S4Q6-1 [UniParc]FASTAAdd to Basket

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    MDDVANDSGH RLGTRDGGDD DDDDAEEDGA RLTSEPSTSG ASLRYATARD    50
    VPFRKLCGAF EALQNERGRS KATSARRYRV LDTLHDRCLV SARDGTRVDA 100
    FDAYRLILPA LDKERGAYFL KHDALAKVVV SAFDMSRASE DAKKLEDWKR 150
    KGGGNFPQVV RDVLAGGHLA DREKDEDART LTIGDVNEAL DALAACDNKD 200
    QRASTLRALF SKMDATQVKW TCAIILKETK ISMGEKAILR HYHSEANDLW 250
    DWTSDLRRVC EDLPRRDFRM KREDIDVGVG LINPQMARRQ NSIDAVYRAL 300
    KGTQFVIETK FDGERIQIHK DGDIINYWTR NMNDFGPRGY DVMNALFRHL 350
    PKRCILDGEL MVWNKLRDQS YPFGALKNLI KAANMRKAKD ELFPLKAHLE 400
    NRDGGDSDGE EDLMSSKYAW YAENVKKLTY GDLELVYVPF DILYAVDRSV 450
    KTHKLRERHE LLKEHVREVS VMCGNIRARI LLATPDCAFS RVGSTKEDIE 500
    RALLEAMDNG EEGLVIKDLD GPWIPGDRSN NWMKIKPDYL SSEDLDVVLI 550
    GGYYGAGELR GGKISQFLCG IVEATNDPIS TASDGVKIMS FCKVGTGISA 600
    MQLDDLRSRL GDFMHREKPQ DMNYNVTDAY NEKPDVWIWP PQRSLVVTVK 650
    GDIRAIRTTT FATGYSLRFP RVTGIRYDKK WSDILTLCDL LKTIEEEVPT 700
    LKVNIDDTRG GTNARKRSRT TGPATLLPAH LMPVDVSGVV QESEIFKNMQ 750
    VHIANCESRE QKQELFKAVI ARSGTTSELW HKHVTHSVAL NRDGSKFRTA 800
    SREGDVYTIA WLQECIHEGR VVPPKPRHRL HLSATTWYGT DAMDRYGDDH 850
    FSDCNLADVH ALVHQVGDQT KRWKTAEVPA LVELDREYPS VCADVKLLTF 900
    RGCVFEIDDS LGKDARVDEQ SSMFPSVLAG ERRNVEQILR IYGGKLAPEG 950
    RMGTHIVRMY DDSVVFEDMD DGRKQVSLSW VKRCIDRSTT ADVV 994
    Length:994
    Mass (Da):112,295
    Last modified:May 15, 2007 - v1
    Checksum:i7FE77DE6D70931E3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000591 Genomic DNA. Translation: ABO98602.1.
    RefSeqiXP_001420309.1. XM_001420272.1.

    Genome annotation databases

    GeneIDi5004601.
    KEGGiolu:OSTLU_26493.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000591 Genomic DNA. Translation: ABO98602.1 .
    RefSeqi XP_001420309.1. XM_001420272.1.

    3D structure databases

    ProteinModelPortali A4S4Q6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 436017.A4S4Q6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5004601.
    KEGGi olu:OSTLU_26493.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000265334.
    KOi K10777.
    OMAi CESREQK.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProi IPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCE9901Imported.

    Entry informationi

    Entry nameiA4S4Q6_OSTLU
    AccessioniPrimary (citable) accession number: A4S4Q6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 15, 2007
    Last sequence update: May 15, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3