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A4S4Q6

- A4S4Q6_OSTLU

UniProt

A4S4Q6 - A4S4Q6_OSTLU

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Protein
Submitted name:

Uncharacterized protein

Gene

OSTLU_26493

Organism
Ostreococcus lucimarinus (strain CCE9901)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: EnsemblPlants/Gramene
  2. DNA binding Source: EnsemblPlants/Gramene
  3. DNA ligase (ATP) activity Source: EnsemblPlants/Gramene
  4. metal ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: EnsemblPlants/Gramene
  2. DNA recombination Source: EnsemblPlants/Gramene
  3. DNA replication Source: EnsemblPlants/Gramene
  4. double-strand break repair Source: EnsemblPlants/Gramene
  5. response to X-ray Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:OSTLU_26493Imported
OrganismiOstreococcus lucimarinus (strain CCE9901)Imported
Taxonomic identifieri436017 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaprasinophytesMamiellophyceaeMamiellalesBathycoccaceaeOstreococcus
ProteomesiUP000001568: Chromosome 11

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. nucleus Source: EnsemblPlants/Gramene
  3. plasmodesma Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi436017.A4S4Q6.

Structurei

3D structure databases

ProteinModelPortaliA4S4Q6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000265334.
KOiK10777.
OMAiCESREQK.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4S4Q6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDDVANDSGH RLGTRDGGDD DDDDAEEDGA RLTSEPSTSG ASLRYATARD
60 70 80 90 100
VPFRKLCGAF EALQNERGRS KATSARRYRV LDTLHDRCLV SARDGTRVDA
110 120 130 140 150
FDAYRLILPA LDKERGAYFL KHDALAKVVV SAFDMSRASE DAKKLEDWKR
160 170 180 190 200
KGGGNFPQVV RDVLAGGHLA DREKDEDART LTIGDVNEAL DALAACDNKD
210 220 230 240 250
QRASTLRALF SKMDATQVKW TCAIILKETK ISMGEKAILR HYHSEANDLW
260 270 280 290 300
DWTSDLRRVC EDLPRRDFRM KREDIDVGVG LINPQMARRQ NSIDAVYRAL
310 320 330 340 350
KGTQFVIETK FDGERIQIHK DGDIINYWTR NMNDFGPRGY DVMNALFRHL
360 370 380 390 400
PKRCILDGEL MVWNKLRDQS YPFGALKNLI KAANMRKAKD ELFPLKAHLE
410 420 430 440 450
NRDGGDSDGE EDLMSSKYAW YAENVKKLTY GDLELVYVPF DILYAVDRSV
460 470 480 490 500
KTHKLRERHE LLKEHVREVS VMCGNIRARI LLATPDCAFS RVGSTKEDIE
510 520 530 540 550
RALLEAMDNG EEGLVIKDLD GPWIPGDRSN NWMKIKPDYL SSEDLDVVLI
560 570 580 590 600
GGYYGAGELR GGKISQFLCG IVEATNDPIS TASDGVKIMS FCKVGTGISA
610 620 630 640 650
MQLDDLRSRL GDFMHREKPQ DMNYNVTDAY NEKPDVWIWP PQRSLVVTVK
660 670 680 690 700
GDIRAIRTTT FATGYSLRFP RVTGIRYDKK WSDILTLCDL LKTIEEEVPT
710 720 730 740 750
LKVNIDDTRG GTNARKRSRT TGPATLLPAH LMPVDVSGVV QESEIFKNMQ
760 770 780 790 800
VHIANCESRE QKQELFKAVI ARSGTTSELW HKHVTHSVAL NRDGSKFRTA
810 820 830 840 850
SREGDVYTIA WLQECIHEGR VVPPKPRHRL HLSATTWYGT DAMDRYGDDH
860 870 880 890 900
FSDCNLADVH ALVHQVGDQT KRWKTAEVPA LVELDREYPS VCADVKLLTF
910 920 930 940 950
RGCVFEIDDS LGKDARVDEQ SSMFPSVLAG ERRNVEQILR IYGGKLAPEG
960 970 980 990
RMGTHIVRMY DDSVVFEDMD DGRKQVSLSW VKRCIDRSTT ADVV
Length:994
Mass (Da):112,295
Last modified:May 15, 2007 - v1
Checksum:i7FE77DE6D70931E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000591 Genomic DNA. Translation: ABO98602.1.
RefSeqiXP_001420309.1. XM_001420272.1.

Genome annotation databases

EnsemblPlantsiABO98602; ABO98602; OSTLU_26493.
GeneIDi5004601.
KEGGiolu:OSTLU_26493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000591 Genomic DNA. Translation: ABO98602.1 .
RefSeqi XP_001420309.1. XM_001420272.1.

3D structure databases

ProteinModelPortali A4S4Q6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 436017.A4S4Q6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi ABO98602 ; ABO98602 ; OSTLU_26493 .
GeneIDi 5004601.
KEGGi olu:OSTLU_26493.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000265334.
KOi K10777.
OMAi CESREQK.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCE9901Imported.

Entry informationi

Entry nameiA4S4Q6_OSTLU
AccessioniPrimary (citable) accession number: A4S4Q6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: November 26, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3