A4S1U9 (A4S1U9_OSTLU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL ABO97723.1

Gene names

ORF Names:

OSTLU_16561 EMBL ABO97723.1

Organism

Ostreococcus lucimarinus (strain CCE9901) [Complete proteome]

Taxonomic identifier

436017 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus

Protein attributes

Sequence length	623 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tRNA aminoacylation for protein translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW aminoacyl-tRNA ligase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4S1U9 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 5ADCB3EE74997ACD	FASTA	623	68,151
	10 20 30 40 50 60 MARVDSTRAR ASSSSSEALE WPSRDRLAGT LRDGDVGAEA TLCGWIDKSR DMGGIAFADV 70 80 90 100 110 120 RDHSGIAQIV ADEDASAEVR ETFGNLRQEC VVRARGTVRA RKSVNKKTKT GTVELVVTEL 130 140 150 160 170 180 KILNSVGKSL PFAVSESSGE KEEIKEETRL EHRVLDLRRP QMARNLKLRH DTLRALRKVM 190 200 210 220 230 240 EDDYGFLEVE TPMLTRSTPE GARDYLVPSR LQPGGAYALP QSPQLFKQML MVAGVDRYYQ 250 260 270 280 290 300 VARCFRDEDL RADRQPEFTQ LDIEMAFTDD AGIMKLAEDL MRAAFKSGVD VDLPASFPQM 310 320 330 340 350 360 TYAHAMEKYG SDKPDLRYGL EMTTLDDALA GCEFKIFADA LAESNGTVKA LVVDDDKKIP 370 380 390 400 410 420 NSKLKPKGDV FNEALAAGAG GLAFARVADD GKSLEGAKGL VEGTAAHAAA MISASGAKPG 430 440 450 460 470 480 DLMLFAAGNK ALVNKTLDRV RQYIAKTYDM IPENAHAVLW ITEFPMFEFN EDENRYEAMH 490 500 510 520 530 540 HPFTAPNQDD AAANPDDLTG ARAIAYDLVY NGVEIGGGSL RIYRRDVQEK VFRAIGLSDE 550 560 570 580 590 600 EAENKFGYLM EAFQYGAPPH GGLAFGLDRL VMMLAGAKSI RDVIAFPKTA AGQCLLTEAP 610 620 GQVSDAQYAD LHVRSVAPPP KTD

References

[1]

"The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. , Tai V., Vallon O., Piganeau G., Jancek S., Heijde M., Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I., Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D., Van de Peer Y., Moreau H., Grigoriev I.V. Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed: 17460045] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000588 Genomic DNA. Translation: ABO97723.1.
RefSeq	XP_001419430.1. XM_001419393.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4S1U9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5003126.
KEGG	olu:OSTLU_16561.
Phylogenomic databases
HOGENOM	HBG396032.
OMA	SFATGED.
PhylomeDB	A4S1U9.
ProtClustDB	PLN02903.
Family and domain databases
HAMAP	MF_00044_B. Asp_tRNA_synth_B. [Tree]
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004524. Asp-tRNA-synth_IIb_bac/mt. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR004115. GAD_dom. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:3.30.1360.30. GAD_dom. 1 hit. G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01876.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF5. AspS_bac. 1 hit.
Pfam	PF02938. GAD. 1 hit. PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF55261. SSF55261. 1 hit.
TIGRFAMs	TIGR00459. AspS_bact. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4S1U9_OSTLU

Accession

Primary (citable) accession number: A4S1U9

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)