A4RVA2 (A4RVA2_OSTLU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Plastid ribosomal protein S13 small ribosomal subunit EMBL ABO95098.1

Gene names

Name:	PRPS13
ORF Names:	OSTLU_9160 EMBL ABO95098.1

Organism

Ostreococcus lucimarinus (strain CCE9901) [Complete proteome]

Taxonomic identifier

436017 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus

Protein attributes

Sequence length	119 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S13P family. RuleBase RU003830

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003830 EMBL ABO95098.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL ABO95098.1
	Non-terminal residue	119	1	EMBL ABO95098.1

Sequences

	Sequence		Length	Mass (Da)
	A4RVA2 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: D71161FDE50D8656	FASTA	119	13,698
	10 20 30 40 50 60 ARVAGVEIPN NKRCETALTY VYGIGETSAK AIMAATGLEN KRLREFSEQE LTQLREEVEK 70 80 90 100 110 YQIEGELRRF ITMNIKRLKE IQCHRGKMHI RNLPVRGQRT KTNARTRKGK VKTVAGKKK

References

[1]

"The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. , Tai V., Vallon O., Piganeau G., Jancek S., Heijde M., Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I., Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D., Van de Peer Y., Moreau H., Grigoriev I.V. Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed: 17460045] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000583 Genomic DNA. Translation: ABO95098.1.
RefSeq	XP_001416805.1. XM_001416768.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4RVA2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5001127.
GenomeReviews	Gene locus PRPS13 in contig CP000583_GR.
KEGG	olu:OSTLU_9160.
Phylogenomic databases
HOGENOM	HBG737405.
OMA	YRGRRHR.
PhylomeDB	A4RVA2.
Family and domain databases
InterPro	IPR001892. Ribosomal_S13. IPR010979. Ribosomal_S13-like_H2TH. IPR019980. Ribosomal_S13_bac-type. [Graphical view]
KO	K02952.
PANTHER	PTHR10871. PTHR10871. 1 hit.
Pfam	PF00416. Ribosomal_S13. 1 hit. [Graphical view]
PIRSF	PIRSF002134. Ribosomal_S13. 1 hit.
SUPFAM	SSF46946. Ribosomal_H2TH. 1 hit.
TIGRFAMs	TIGR03631. Bact_S13. 1 hit.
PROSITE	PS50159. RIBOSOMAL_S13_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4RVA2_OSTLU

Accession

Primary (citable) accession number: A4RVA2

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)