A4RTA1 (A4RTA1_OSTLU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL ABO94402.1

Gene names

ORF Names:

OSTLU_36228 EMBL ABO94402.1

Organism

Ostreococcus lucimarinus (strain CCE9901) [Complete proteome]

Taxonomic identifier

436017 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus › Ostreococcus 'lucimarinus'

Protein attributes

Sequence length	453 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4RTA1 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: EA6D4535DDABD725	FASTA	453	49,295
	10 20 30 40 50 60 MGVPLNFRSG ESPISINNLT TAMNAVLDNS VRSSHPMFMN QLYAGVDPIA LAGEWASSAL 70 80 90 100 110 120 NSNVHTFEVA PILTEIERSM LAKIASLWLG ENADGSAPDH DGLFVPGGSI ANLYSMILAR 130 140 150 160 170 180 ERACPEAKKT GMPQGYVAFC SEQSHYSYKK CAHMIGLGMD NMIKVDCGKN GAMLPEALEA 190 200 210 220 230 240 AIAAAKAAGK TPFYCGATAG STVLGAYDPF AALADVCAKD NVWLHVDGAW GGAALVSKQH 250 260 270 280 290 300 KHLMNGVERA DSFCWNPHKL LGIPLQCSIV LSRHAGEFMA ANSYKADYLF QPDKNNTEAD 310 320 330 340 350 360 LGDRTIQCGR KSDALKLWLA WKYRGDEGWE KLVDHAFSLA KFVEAEVVQD TTGAWALATP 370 380 390 400 410 420 AQCANVGFWY VPPRLRPFNK DTATPEQFAE IAKVAPKLKD RMQRAGDAMI GFQPVPALNL 430 440 450 PNFFRLVLPN PRHNSETKLR ELMKRMDAMG ADL

References

[1]

"The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. , Tai V., Vallon O., Piganeau G., Jancek S., Heijde M., Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I., Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D., Van de Peer Y., Moreau H., Grigoriev I.V. Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCE9901.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000582 Genomic DNA. Translation: ABO94402.1.
RefSeq	XP_001416110.1. XM_001416073.1.
3D structure databases
ProteinModelPortal	A4RTA1.
ModBase	Search...
Protein-protein interaction databases
STRING	436017.A4RTA1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5000163.
KEGG	olu:OSTLU_36228.
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000005382.
KO	K01580.
OMA	XNLLKRC.
ProtClustDB	CLSN2699496.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4RTA1_OSTLU

Accession

Primary (citable) accession number: A4RTA1

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	April 3, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)