A4RRJ1 (A4RRJ1_OSTLU) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 31.
History...
Names and origin
| Protein names | Submitted name: Putative mitochondrial ribosomal protein L2 EMBL ABO93869.1 | ||||
| Gene names |
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| Organism | Ostreococcus lucimarinus (strain CCE9901) [Complete proteome] | ||||
| Taxonomic identifier | 436017 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus |
Protein attributes
| Sequence length | 283 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Ribonucleoprotein Ribosomal protein EMBL ABO93869.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | translation Inferred from electronic annotation. Source: InterPro |
| Cellular component | large ribosomal subunit Inferred from electronic annotation. Source: InterPro |
| Molecular function | RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosomeInferred from electronic annotation. Source: InterPro transferase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. Grigoriev I.V.Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed: 17460045] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000581 Genomic DNA. Translation: ABO93869.1. |
| RefSeq | XP_001415577.1. XM_001415540.1. |
3D structure databases | |
| ProteinModelPortal | A4RRJ1. |
| SMR | A4RRJ1. Positions 60-194. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A4RRJ1. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4999552. |
| GenomeReviews | Gene locus MRPL2 in contig CP000581_GR. |
| KEGG | olu:OSTLU_29034. |
Phylogenomic databases | |
| HOGENOM | HBG748739. |
| OMA | QSNINWG. |
| PhylomeDB | A4RRJ1. |
| ProtClustDB | CLSN2699271. |
Family and domain databases | |
| HAMAP | MF_01320_B. Ribosomal_L2_B. [Tree] |
| InterPro | IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022666. Rbsml_prot_L2_RNA-bd_dom. IPR002171. Ribosomal_L2. IPR014726. Ribosomal_L2_3. IPR005880. Ribosomal_L2_bac-type. IPR022669. Ribosomal_L2_C. IPR022671. Ribosomal_L2_CS. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view] |
| Gene3D | G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit. G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:4.10.950.10. Ribosomal_L2. 1 hit. |
| PANTHER | PTHR13691:SF5. Ribosom_L2_bac. 1 hit. PTHR13691. Ribosomal_L2. 1 hit. |
| Pfam | PF00181. Ribosomal_L2. 1 hit. PF03947. Ribosomal_L2_C. 1 hit. [Graphical view] |
| PIRSF | PIRSF002158. Ribosomal_L2. 1 hit. |
| SUPFAM | SSF50249. Nucleic_acid_OB. 1 hit. SSF50104. Transl_SH3_like. 1 hit. |
| TIGRFAMs | TIGR01171. RplB_bact. 1 hit. |
| PROSITE | PS00467. RIBOSOMAL_L2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A4RRJ1_OSTLU | ||||||||
| Accession | Primary (citable) accession number: A4RRJ1 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
