A4RQK2 (A4RQK2_OSTLU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
IISP family transporter: signal recognition particle protein (SRP54) EMBL ABO94038.1

Gene names

ORF Names:

OSTLU_39979 EMBL ABO94038.1

Organism

Ostreococcus lucimarinus (strain CCE9901) [Complete proteome]

Taxonomic identifier

436017 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus

Protein attributes

Sequence length	498 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	SRP-dependent cotranslational protein targeting to membrane Inferred from electronic annotation. Source: InterPro
Cellular component	signal recognition particle Inferred from electronic annotation. Source: InterPro
Molecular function	7S RNA binding Inferred from electronic annotation. Source: InterPro GTP binding Inferred from electronic annotation. Source: InterPro nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4RQK2 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 0C72F62F8CFA0A01	FASTA	498	53,766
	10 20 30 40 50 60 MTRADAFAGM SDKLDKAWAR LQGEKDLNAD NVKAPLKDVR RALLEADVSL PVVRRFIARC 70 80 90 100 110 120 EEKAVGMKVT KGVEPGQMLV KCVADELCEL MGGVGAEGIK FRDDGEPTVV LMAGLQGVGK 130 140 150 160 170 180 TTACGKLSLA LRKQGKSVLL VATDVYRPAA IDQLKTLGKQ IGVPVFDMGV DGNPPEIAAR 190 200 210 220 230 240 GVRKAKDEDI DVVIVDTAGR LNIDEKLMGE LKATKEATSA DETLLVVDAM TGQEAATLTA 250 260 270 280 290 300 SFNEAVEITG AILTKMDGDT RGGAALSVRE VSGKPIKFTG VGEKMDALEP FYPERMTSRI 310 320 330 340 350 360 LGMGDIVSLV EKVQAGVKEE EAEKIKQKIM SATFDFNDFV GQLEMMNNMG GMKQIMQMMP 370 380 390 400 410 420 GTAKLSEADM EAAGKSMTIA KSLINSMTKE ERQYPDMLVA STTADSRRQR IVKGSGRTEA 430 440 450 460 470 480 DLAQLIMMFG GMRTQMQKMS GQLGGQAGDV GLQPQLSEAE LSKLAMNKIR KTVKPGMVRR 490 QKAKKVPKFL AERESFSQ

References

[1]

"The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation." Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., Manuell A. , Tai V., Vallon O., Piganeau G., Jancek S., Heijde M., Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I., Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D., Van de Peer Y., Moreau H., Grigoriev I.V. Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007) [PubMed: 17460045] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000581 Genomic DNA. Translation: ABO94038.1.
RefSeq	XP_001415746.1. XM_001415709.1.
3D structure databases
ProteinModelPortal	A4RQK2.
ModBase	Search...
Protein-protein interaction databases
STRING	A4RQK2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4999948.
KEGG	olu:OSTLU_39979.
Phylogenomic databases
HOGENOM	HBG562580.
OMA	NVEIGIT.
PhylomeDB	A4RQK2.
ProtClustDB	CLSN2686225.
Family and domain databases
InterPro	IPR003593. ATPase_AAA+_core. IPR000897. Signal_recog_part_SRP54_GTPase. IPR013822. Signal_recog_particl_SRP54_hlx. IPR004780. Signal_recog_particle_SRP. IPR004125. Signal_recog_particle_SRP54_M. [Graphical view]
Gene3D	G3DSA:1.20.120.140. SRP54_helical. 1 hit. G3DSA:1.10.260.30. SRP54_M. 1 hit.
KO	K03106.
PANTHER	PTHR11564:SF7. SRP_sub. 1 hit.
Pfam	PF00448. SRP54. 1 hit. PF02881. SRP54_N. 1 hit. PF02978. SRP_SPB. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. SM00962. SRP54. 1 hit. SM00963. SRP54_N. 1 hit. [Graphical view]
SUPFAM	SSF47446. Signal_recog_particle_SRP54_M. 1 hit. SSF47364. SRP54. 1 hit.
TIGRFAMs	TIGR00959. Ffh. 1 hit.
PROSITE	PS00300. SRP54. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4RQK2_OSTLU

Accession

Primary (citable) accession number: A4RQK2

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)