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A4QMS7

- CE049_HUMAN

UniProt

A4QMS7 - CE049_HUMAN

Protein

Uncharacterized protein C5orf49

Gene

C5orf49

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C5orf49
    Gene namesi
    Name:C5orf49
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 5

    Organism-specific databases

    HGNCiHGNC:27028. C5orf49.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA162380347.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 147147Uncharacterized protein C5orf49PRO_0000336090Add
    BLAST

    Proteomic databases

    PaxDbiA4QMS7.
    PRIDEiA4QMS7.

    PTM databases

    PhosphoSiteiA4QMS7.

    Expressioni

    Gene expression databases

    ArrayExpressiA4QMS7.
    BgeeiA4QMS7.
    CleanExiHS_C5orf49.
    GenevestigatoriA4QMS7.

    Organism-specific databases

    HPAiHPA043759.

    Interactioni

    Protein-protein interaction databases

    STRINGi9606.ENSP00000382708.

    Structurei

    3D structure databases

    ProteinModelPortaliA4QMS7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG45406.
    HOGENOMiHOG000111518.
    HOVERGENiHBG095480.
    InParanoidiA4QMS7.
    OMAiFGHIAPS.
    OrthoDBiEOG7T4MNP.
    PhylomeDBiA4QMS7.
    TreeFamiTF328385.

    Family and domain databases

    InterProiIPR027901. DUF4541.
    [Graphical view]
    PfamiPF15074. DUF4541. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4QMS7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEDDEEETTA STLRGKPRPP PVSAQSAFSY IPPRRLDPKE HSYYYRPART    50
    GIISLYDCIF KRRLDYDQKL HRDDREHAKS LGLHVNEEEQ ERPVGVLTSS 100
    VYGKRINQPI EPLNRDFGRA NHVQADFYRK NDIPSLKEPG FGHIAPS 147
    Length:147
    Mass (Da):16,991
    Last modified:May 15, 2007 - v1
    Checksum:i7062F33544448479
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti68 – 681Q → H.
    Corresponds to variant rs6883562 [ dbSNP | Ensembl ].
    VAR_043546
    Natural varianti87 – 871E → K.
    Corresponds to variant rs16879215 [ dbSNP | Ensembl ].
    VAR_043547
    Natural varianti139 – 1391P → S.
    Corresponds to variant rs326181 [ dbSNP | Ensembl ].
    VAR_043548

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH471102 Genomic DNA. Translation: EAX08096.1.
    BC104205 mRNA. Translation: AAI04206.1.
    BC115361 mRNA. Translation: AAI15362.1.
    CCDSiCCDS43300.1.
    RefSeqiNP_001083053.1. NM_001089584.2.
    UniGeneiHs.709979.

    Genome annotation databases

    EnsembliENST00000399810; ENSP00000382708; ENSG00000215217.
    GeneIDi134121.
    KEGGihsa:134121.
    UCSCiuc003jea.5. human.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH471102 Genomic DNA. Translation: EAX08096.1 .
    BC104205 mRNA. Translation: AAI04206.1 .
    BC115361 mRNA. Translation: AAI15362.1 .
    CCDSi CCDS43300.1.
    RefSeqi NP_001083053.1. NM_001089584.2.
    UniGenei Hs.709979.

    3D structure databases

    ProteinModelPortali A4QMS7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9606.ENSP00000382708.

    PTM databases

    PhosphoSitei A4QMS7.

    Proteomic databases

    PaxDbi A4QMS7.
    PRIDEi A4QMS7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000399810 ; ENSP00000382708 ; ENSG00000215217 .
    GeneIDi 134121.
    KEGGi hsa:134121.
    UCSCi uc003jea.5. human.

    Organism-specific databases

    CTDi 134121.
    GeneCardsi GC05M007886.
    HGNCi HGNC:27028. C5orf49.
    HPAi HPA043759.
    neXtProti NX_A4QMS7.
    PharmGKBi PA162380347.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG45406.
    HOGENOMi HOG000111518.
    HOVERGENi HBG095480.
    InParanoidi A4QMS7.
    OMAi FGHIAPS.
    OrthoDBi EOG7T4MNP.
    PhylomeDBi A4QMS7.
    TreeFami TF328385.

    Miscellaneous databases

    GenomeRNAii 134121.
    NextBioi 83318.

    Gene expression databases

    ArrayExpressi A4QMS7.
    Bgeei A4QMS7.
    CleanExi HS_C5orf49.
    Genevestigatori A4QMS7.

    Family and domain databases

    InterProi IPR027901. DUF4541.
    [Graphical view ]
    Pfami PF15074. DUF4541. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiCE049_HUMAN
    AccessioniPrimary (citable) accession number: A4QMS7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 20, 2008
    Last sequence update: May 15, 2007
    Last modified: July 9, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 5
      Human chromosome 5: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations

    External Data

    Dasty 3