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Protein

Uncharacterized protein C5orf49

Gene

C5orf49

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciZFISH:G66-30768-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C5orf49
Gene namesi
Name:C5orf49
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 5

Organism-specific databases

HGNCiHGNC:27028. C5orf49.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000215217.
PharmGKBiPA162380347.

Polymorphism and mutation databases

BioMutaiC5orf49.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003360901 – 147Uncharacterized protein C5orf49Add BLAST147

Proteomic databases

PaxDbiA4QMS7.
PRIDEiA4QMS7.

PTM databases

iPTMnetiA4QMS7.
PhosphoSitePlusiA4QMS7.

Expressioni

Gene expression databases

BgeeiENSG00000215217.
CleanExiHS_C5orf49.
ExpressionAtlasiA4QMS7. baseline and differential.
GenevisibleiA4QMS7. HS.

Organism-specific databases

HPAiHPA043759.

Interactioni

Protein-protein interaction databases

IntActiA4QMS7. 2 interactors.

Structurei

3D structure databases

ProteinModelPortaliA4QMS7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IY7J. Eukaryota.
ENOG4112CKR. LUCA.
GeneTreeiENSGT00390000015121.
HOGENOMiHOG000111518.
HOVERGENiHBG095480.
InParanoidiA4QMS7.
OMAiNKLHRDD.
OrthoDBiEOG091G0S4B.
PhylomeDBiA4QMS7.
TreeFamiTF328385.

Family and domain databases

InterProiIPR027901. DUF4541.
[Graphical view]
PfamiPF15074. DUF4541. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4QMS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDDEEETTA STLRGKPRPP PVSAQSAFSY IPPRRLDPKE HSYYYRPART
60 70 80 90 100
GIISLYDCIF KRRLDYDQKL HRDDREHAKS LGLHVNEEEQ ERPVGVLTSS
110 120 130 140
VYGKRINQPI EPLNRDFGRA NHVQADFYRK NDIPSLKEPG FGHIAPS
Length:147
Mass (Da):16,991
Last modified:May 15, 2007 - v1
Checksum:i7062F33544448479
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_04354668Q → H.Corresponds to variant rs6883562dbSNPEnsembl.1
Natural variantiVAR_04354787E → K.Corresponds to variant rs16879215dbSNPEnsembl.1
Natural variantiVAR_043548139P → S.Corresponds to variant rs326181dbSNPEnsembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH471102 Genomic DNA. Translation: EAX08096.1.
BC104205 mRNA. Translation: AAI04206.1.
BC115361 mRNA. Translation: AAI15362.1.
CCDSiCCDS43300.1.
RefSeqiNP_001083053.1. NM_001089584.2.
UniGeneiHs.709979.

Genome annotation databases

EnsembliENST00000399810; ENSP00000382708; ENSG00000215217.
GeneIDi134121.
KEGGihsa:134121.
UCSCiuc003jea.7. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH471102 Genomic DNA. Translation: EAX08096.1.
BC104205 mRNA. Translation: AAI04206.1.
BC115361 mRNA. Translation: AAI15362.1.
CCDSiCCDS43300.1.
RefSeqiNP_001083053.1. NM_001089584.2.
UniGeneiHs.709979.

3D structure databases

ProteinModelPortaliA4QMS7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA4QMS7. 2 interactors.

PTM databases

iPTMnetiA4QMS7.
PhosphoSitePlusiA4QMS7.

Polymorphism and mutation databases

BioMutaiC5orf49.

Proteomic databases

PaxDbiA4QMS7.
PRIDEiA4QMS7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000399810; ENSP00000382708; ENSG00000215217.
GeneIDi134121.
KEGGihsa:134121.
UCSCiuc003jea.7. human.

Organism-specific databases

CTDi134121.
GeneCardsiC5orf49.
HGNCiHGNC:27028. C5orf49.
HPAiHPA043759.
neXtProtiNX_A4QMS7.
OpenTargetsiENSG00000215217.
PharmGKBiPA162380347.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IY7J. Eukaryota.
ENOG4112CKR. LUCA.
GeneTreeiENSGT00390000015121.
HOGENOMiHOG000111518.
HOVERGENiHBG095480.
InParanoidiA4QMS7.
OMAiNKLHRDD.
OrthoDBiEOG091G0S4B.
PhylomeDBiA4QMS7.
TreeFamiTF328385.

Enzyme and pathway databases

BioCyciZFISH:G66-30768-MONOMER.

Miscellaneous databases

GenomeRNAii134121.
PROiA4QMS7.

Gene expression databases

BgeeiENSG00000215217.
CleanExiHS_C5orf49.
ExpressionAtlasiA4QMS7. baseline and differential.
GenevisibleiA4QMS7. HS.

Family and domain databases

InterProiIPR027901. DUF4541.
[Graphical view]
PfamiPF15074. DUF4541. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCE049_HUMAN
AccessioniPrimary (citable) accession number: A4QMS7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 15, 2007
Last modified: November 30, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 5
    Human chromosome 5: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.