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Protein

Uncharacterized protein C5orf49

Gene

C5orf49

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C5orf49
Gene namesi
Name:C5orf49
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 5

Organism-specific databases

EuPathDBiHostDB:ENSG00000215217.6.
HGNCiHGNC:27028. C5orf49.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000215217.
PharmGKBiPA162380347.

Polymorphism and mutation databases

BioMutaiC5orf49.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003360901 – 147Uncharacterized protein C5orf49Add BLAST147

Proteomic databases

PaxDbiA4QMS7.
PRIDEiA4QMS7.

PTM databases

iPTMnetiA4QMS7.
PhosphoSitePlusiA4QMS7.

Expressioni

Gene expression databases

BgeeiENSG00000215217.
CleanExiHS_C5orf49.
ExpressionAtlasiA4QMS7. baseline and differential.
GenevisibleiA4QMS7. HS.

Organism-specific databases

HPAiHPA043759.

Interactioni

Protein-protein interaction databases

IntActiA4QMS7. 3 interactors.

Structurei

3D structure databases

ProteinModelPortaliA4QMS7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IY7J. Eukaryota.
ENOG4112CKR. LUCA.
GeneTreeiENSGT00390000015121.
HOGENOMiHOG000111518.
HOVERGENiHBG095480.
InParanoidiA4QMS7.
OMAiCVFKRRL.
OrthoDBiEOG091G0S4B.
PhylomeDBiA4QMS7.
TreeFamiTF328385.

Family and domain databases

InterProiView protein in InterPro
IPR027901. DUF4541.
PANTHERiPTHR34444. PTHR34444. 1 hit.
PfamiView protein in Pfam
PF15074. DUF4541. 1 hit.

Sequencei

Sequence statusi: Complete.

A4QMS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDDEEETTA STLRGKPRPP PVSAQSAFSY IPPRRLDPKE HSYYYRPART
60 70 80 90 100
GIISLYDCIF KRRLDYDQKL HRDDREHAKS LGLHVNEEEQ ERPVGVLTSS
110 120 130 140
VYGKRINQPI EPLNRDFGRA NHVQADFYRK NDIPSLKEPG FGHIAPS
Length:147
Mass (Da):16,991
Last modified:May 15, 2007 - v1
Checksum:i7062F33544448479
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_04354668Q → H. Corresponds to variant dbSNP:rs6883562Ensembl.1
Natural variantiVAR_04354787E → K. Corresponds to variant dbSNP:rs16879215Ensembl.1
Natural variantiVAR_043548139P → S. Corresponds to variant dbSNP:rs326181Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH471102 Genomic DNA. Translation: EAX08096.1.
BC104205 mRNA. Translation: AAI04206.1.
BC115361 mRNA. Translation: AAI15362.1.
CCDSiCCDS43300.1.
RefSeqiNP_001083053.1. NM_001089584.2.
UniGeneiHs.709979.

Genome annotation databases

EnsembliENST00000399810; ENSP00000382708; ENSG00000215217.
GeneIDi134121.
KEGGihsa:134121.
UCSCiuc003jea.7. human.

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiCE049_HUMAN
AccessioniPrimary (citable) accession number: A4QMS7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 15, 2007
Last modified: November 22, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 5
    Human chromosome 5: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations