Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A4QMS7 (CE049_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein C5orf49
Gene names
Name:C5orf49
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 147147Uncharacterized protein C5orf49
PRO_0000336090

Natural variations

Natural variant681Q → H.
Corresponds to variant rs6883562 [ dbSNP | Ensembl ].
VAR_043546
Natural variant871E → K.
Corresponds to variant rs16879215 [ dbSNP | Ensembl ].
VAR_043547
Natural variant1391P → S.
Corresponds to variant rs326181 [ dbSNP | Ensembl ].
VAR_043548

Sequences

Sequence LengthMass (Da)Tools
A4QMS7 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 7062F33544448479

FASTA14716,991
        10         20         30         40         50         60 
MEDDEEETTA STLRGKPRPP PVSAQSAFSY IPPRRLDPKE HSYYYRPART GIISLYDCIF 

        70         80         90        100        110        120 
KRRLDYDQKL HRDDREHAKS LGLHVNEEEQ ERPVGVLTSS VYGKRINQPI EPLNRDFGRA 

       130        140 
NHVQADFYRK NDIPSLKEPG FGHIAPS 

« Hide

References

[1]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH471102 Genomic DNA. Translation: EAX08096.1.
BC104205 mRNA. Translation: AAI04206.1.
BC115361 mRNA. Translation: AAI15362.1.
RefSeqNP_001083053.1. NM_001089584.2.
UniGeneHs.709979.

3D structure databases

ProteinModelPortalA4QMS7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9606.ENSP00000382708.

PTM databases

PhosphoSiteA4QMS7.

Proteomic databases

PaxDbA4QMS7.
PRIDEA4QMS7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000399810; ENSP00000382708; ENSG00000215217.
GeneID134121.
KEGGhsa:134121.
UCSCuc003jea.5. human.

Organism-specific databases

CTD134121.
GeneCardsGC05M007886.
HGNCHGNC:27028. C5orf49.
HPAHPA043759.
neXtProtNX_A4QMS7.
PharmGKBPA162380347.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG45406.
HOGENOMHOG000111518.
HOVERGENHBG095480.
InParanoidA4QMS7.
OMAPKEYSYY.
OrthoDBEOG7T4MNP.
PhylomeDBA4QMS7.
TreeFamTF328385.

Gene expression databases

ArrayExpressA4QMS7.
BgeeA4QMS7.
CleanExHS_C5orf49.
GenevestigatorA4QMS7.

Family and domain databases

InterProIPR027901. DUF4541.
[Graphical view]
PfamPF15074. DUF4541. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi134121.
NextBio83318.

Entry information

Entry nameCE049_HUMAN
AccessionPrimary (citable) accession number: A4QMS7
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 15, 2007
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 5

Human chromosome 5: entries, gene names and cross-references to MIM