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A4QHN8

- DCD_CORGB

UniProt

A4QHN8 - DCD_CORGB

Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Corynebacterium glutamicum (strain R)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (15 May 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dCTP + H2O = dUTP + NH3.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. dCTP deaminase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. dUMP biosynthetic process Source: UniProtKB-UniPathway
    2. dUTP biosynthetic process Source: InterPro
    3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Nucleotide metabolism

    Enzyme and pathway databases

    BioCyciCGLU340322:GJBE-2865-MONOMER.
    UniPathwayiUPA00610; UER00665.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
    Short name:
    dCTP deaminaseUniRule annotation
    Gene namesi
    Name:dcdUniRule annotation
    Ordered Locus Names:cgR_2737
    OrganismiCorynebacterium glutamicum (strain R)
    Taxonomic identifieri340322 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
    ProteomesiUP000006698: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 189189Deoxycytidine triphosphate deaminasePRO_1000009712Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi340322.cgR_2737.

    Structurei

    3D structure databases

    ProteinModelPortaliA4QHN8.
    SMRiA4QHN8. Positions 1-186.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the dCTP deaminase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0717.
    HOGENOMiHOG000228601.
    KOiK01494.
    OMAiRPGMMIG.
    OrthoDBiEOG67DPKR.

    Family and domain databases

    Gene3Di2.70.40.10. 1 hit.
    HAMAPiMF_00146. dCTP_deaminase.
    InterProiIPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    IPR008180. dUTPase/dCTP_deaminase.
    [Graphical view]
    PfamiPF00692. dUTPase. 1 hit.
    [Graphical view]
    SUPFAMiSSF51283. SSF51283. 1 hit.
    TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A4QHN8-1 [UniParc]FASTAAdd to Basket

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    MLLSDRDIRK SIDAGDLGIE PFDAELIQPS SVDVRMDRYF RVFNNSKYTH    50
    IDPKLNQDEL TSLVEVEDGE GFVLHPGEFV LASTLEKFTL PAHLAGRLEG 100
    KSSLGRLGLL THSTAGFIDP GFSGYITLEL SNVANLPITL WPGMKVGQLA 150
    LFQMSSPAET PYGSGKLGSK YQGQRGPTPS KAYLNFPNK 189
    Length:189
    Mass (Da):20,689
    Last modified:May 15, 2007 - v1
    Checksum:i820B4484A31A67EB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009044 Genomic DNA. Translation: BAF55754.1.
    RefSeqiYP_001139656.1. NC_009342.1.

    Genome annotation databases

    EnsemblBacteriaiBAF55754; BAF55754; cgR_2737.
    GeneIDi4993773.
    KEGGicgt:cgR_2737.
    PATRICi21510162. VBICorGlu58097_2803.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009044 Genomic DNA. Translation: BAF55754.1 .
    RefSeqi YP_001139656.1. NC_009342.1.

    3D structure databases

    ProteinModelPortali A4QHN8.
    SMRi A4QHN8. Positions 1-186.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 340322.cgR_2737.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAF55754 ; BAF55754 ; cgR_2737 .
    GeneIDi 4993773.
    KEGGi cgt:cgR_2737.
    PATRICi 21510162. VBICorGlu58097_2803.

    Phylogenomic databases

    eggNOGi COG0717.
    HOGENOMi HOG000228601.
    KOi K01494.
    OMAi RPGMMIG.
    OrthoDBi EOG67DPKR.

    Enzyme and pathway databases

    UniPathwayi UPA00610 ; UER00665 .
    BioCyci CGLU340322:GJBE-2865-MONOMER.

    Family and domain databases

    Gene3Di 2.70.40.10. 1 hit.
    HAMAPi MF_00146. dCTP_deaminase.
    InterProi IPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    IPR008180. dUTPase/dCTP_deaminase.
    [Graphical view ]
    Pfami PF00692. dUTPase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51283. SSF51283. 1 hit.
    TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R."
      Yukawa H., Omumasaba C.A., Nonaka H., Kos P., Okai N., Suzuki N., Suda M., Tsuge Y., Watanabe J., Ikeda Y., Vertes A.A., Inui M.
      Microbiology 153:1042-1058(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: R.

    Entry informationi

    Entry nameiDCD_CORGB
    AccessioniPrimary (citable) accession number: A4QHN8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: May 15, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3