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A4QED4 (A4QED4_CORGB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:cgR_1608 EMBL BAF54600.1
OrganismCorynebacterium glutamicum (strain R) [Complete proteome] [HAMAP] EMBL BAF54600.1
Taxonomic identifier340322 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length909 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4QED4 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: A76B8223D31BD78F

FASTA90996,616
        10         20         30         40         50         60 
MSRRKAVFSA LGAAALIGAA LPTIPTAQAQ TPTGYGFDAT ASIGEEPEFS TQQLADGGTL 

        70         80         90        100        110        120 
GFDCYRIPSL GVAPNGNVLA SWDGRPNNCS DAPQPNSIVG KVSTDNGATW GEQHDISAGI 

       130        140        150        160        170        180 
TAEPKTGYSD PSIVVDWERG DVFNFHVKSF DAGYFTSQPG TDPDDRNVAH VAYAKSSDNG 

       190        200        210        220        230        240 
STWVADTVIT DQVVADDTWD SRFATSGNGI QLQYGAYKGR LVQPSVTRMT NGRVAAVAML 

       250        260        270        280        290        300 
SDDHGTTWYP SAPWGNSMDE NKIVELSDGT LMNNSRSSGA DTYRKVSYST DGGVTWTEPT 

       310        320        330        340        350        360 
LDTQLPDPRN NASLIRVFPT APEGSAQAKV LLFSNTATTS GRTNGTVRMS CDDGQTWPVS 

       370        380        390        400        410        420 
KVFEPGAIQY TSMATLPNGD IGMLWENSGS NIDIFYSQFN LSWLEAGCIG VDADETPVTA 

       430        440        450        460        470        480 
GETTTMNVTL TNPFANAIFD RAVSLELPEG WQAEDVRVSI PSGESVTIPV QVTAPLVADN 

       490        500        510        520        530        540 
GELPVEVSIL DGADRYTGRL NLTVQGGQEP ASTSVKVSIP NLKDTYVAGE KISINFAVNN 

       550        560        570        580        590        600 
PFDVTVNSVP SLGEGENWMP ANLRGFDPEQ GAPNCRYRNL GANQSYNCTT TTYEVSDSDV 

       610        620        630        640        650        660 
ERGYVDIPTV WTFTNSAGET VWSKNVDVPR IELNGTQDAV TDAIVTVDPI NPVHSNGQSQ 

       670        680        690        700        710        720 
TVEVQANVTS EGDLPAGSKV AFYLDSSPID AAAVDAEGHA SISIDVDNIA SEQPERTFEV 

       730        740        750        760        770        780 
RARLVVPEDA PRSIARDALA RFTVLPEQVQ QNSLVIMNHP DVVSDGQTKT IVIAVKATAH 

       790        800        810        820        830        840 
DGSPVAIGTL ITFRVNGIER DVVPTNAQGT AKLQLDLKPV NTEDEEYEVT VEAELDELTA 

       850        860        870        880        890        900 
QTTFKVLAGE EEEPTSTEEQ PSETEQPSEP EEEPTAPTGS SNGGSFAALL ALLAALGGIV 


GAVLGLLKL 

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References

[1]"Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R."
Yukawa H., Omumasaba C.A., Nonaka H., Kos P., Okai N., Suzuki N., Suda M., Tsuge Y., Watanabe J., Ikeda Y., Vertes A.A., Inui M.
Microbiology 153:1042-1058(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: R EMBL BAF54600.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009044 Genomic DNA. Translation: BAF54600.1.
RefSeqYP_001138502.1. NC_009342.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING340322.cgR_1608.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAF54600; BAF54600; cgR_1608.
GeneID4992407.
KEGGcgt:cgR_1608.
PATRIC21507816. VBICorGlu58097_1659.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4409.
KOK01186.
OrthoDBEOG64JFJ7.
ProtClustDBCLSK633464.

Enzyme and pathway databases

BioCycCGLU340322:GJBE-1682-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProIPR018905. A-galactase_NEW3.
IPR013783. Ig-like_fold.
IPR026948. Sialidase/anhydrosialidase.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
PfamPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4QED4_CORGB
AccessionPrimary (citable) accession number: A4QED4
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)