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Protein
Submitted name:

Fusion protein SYT-SSX2

Gene

SYT-SSX2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Fusion protein SYT-SSX2Imported
Gene namesi
Name:SYT-SSX2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PeptideAtlasiA4PIW0.
PRIDEiA4PIW0.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
ATF2P1533611EBI-6050533,EBI-1170906
TLE1Q0472411EBI-6050533,EBI-711424

Protein-protein interaction databases

IntActiA4PIW0. 13 interactions.

Structurei

3D structure databases

ProteinModelPortaliA4PIW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG003892.

Family and domain databases

InterProiIPR007726. SS18_fam.
IPR019041. SSXRD_motif.
[Graphical view]
PANTHERiPTHR23107. PTHR23107. 1 hit.
PfamiPF09514. SSXRD. 1 hit.
PF05030. SSXT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4PIW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVAFAAPRQ RGKGEITPAA IQKMLDDNNH LIQCIMDSQN KGKTSECSQY
60 70 80 90 100
QQMLHTNLVY LATIADSNQN MQSLLPAPPT QNMPMGPGGM NQSGPPPPPR
110 120 130 140 150
SHNMPSDGMV GGGPPAPHMQ NQMNGQMPGP NHMPMQGPGP NQLNMTNSSM
160 170 180 190 200
NMPSSSHGSM GGYNHSVPSS QSMPVQNQMT MSQGQPMGNY GPRPNMSMQP
210 220 230 240 250
NQGPMMHQQP PSQQYNMPQG GGQHYQGQQP PMGMMGQVNQ GNHMMGQRQI
260 270 280 290 300
PPYRPPQQGP PQQYSGQEDY YGDQYSHGGQ GPPEGMNQQY YPDGNSQYGQ
310 320 330 340 350
QQDAYQGPPP QQGYPPQQQQ YPGQQGYPGQ QQGYGPSQGG PGPQYPNYPQ
360 370 380 390 400
GQGQQYGGYR PTQPGPPQPP QQRPYGYDQI MPKKPAEEGN DSEEVPEASG
410 420 430 440 450
PQNDGKELCP PGKPTTSEKI HERSGPKRGE HAWTHRLRER KQLVIYEEIS

DPEEDDE
Length:457
Mass (Da):50,106
Last modified:May 15, 2007 - v1
Checksum:iED4D19E02B995BBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB300357 mRNA. Translation: BAF56184.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB300357 mRNA. Translation: BAF56184.1.

3D structure databases

ProteinModelPortaliA4PIW0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA4PIW0. 13 interactions.

Proteomic databases

PeptideAtlasiA4PIW0.
PRIDEiA4PIW0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG003892.

Family and domain databases

InterProiIPR007726. SS18_fam.
IPR019041. SSXRD_motif.
[Graphical view]
PANTHERiPTHR23107. PTHR23107. 1 hit.
PfamiPF09514. SSXRD. 1 hit.
PF05030. SSXT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Fusion genes in Synovial Sarcoma cells."
    Ouchida M.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA4PIW0_HUMAN
AccessioniPrimary (citable) accession number: A4PIW0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: July 6, 2016
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.