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Protein
Submitted name:

NADPH-sorbose reductase

Gene

sboA

Organism
Gluconobacter frateurii
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei92 – 921NADP; via carbonyl oxygenCombined sources
Binding sitei142 – 1421NADPCombined sources
Binding sitei157 – 1571NADPCombined sources
Binding sitei161 – 1611NADPCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi16 – 194NADPCombined sources
Nucleotide bindingi39 – 435NADPCombined sources
Nucleotide bindingi65 – 662NADPCombined sources
Nucleotide bindingi190 – 1956NADPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

NADPCombined sources, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BRENDAi1.1.1.289. 9012.

Names & Taxonomyi

Protein namesi
Submitted name:
NADPH-sorbose reductaseImported
Gene namesi
Name:sboAImported
OrganismiGluconobacter frateuriiImported
Taxonomic identifieri38308 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGluconobacter

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3AI1X-ray2.38A/B1-263[»]
3AI2X-ray1.90A/B/C/D/E/F/G/H1-263[»]
3AI3X-ray1.80A/C/E/G1-263[»]
ProteinModelPortaliA4PB64.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA4PB64.

Family & Domainsi

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4PB64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDMGISGKVA VITGSSSGIG LAIAEGFAKE GAHIVLVARQ VDRLHEAARS
60 70 80 90 100
LKEKFGVRVL EVAVDVATPE GVDAVVESVR SSFGGADILV NNAGTGSNET
110 120 130 140 150
IMEAADEKWQ FYWELHVMAA VRLARGLVPG MRARGGGAII HNASICAVQP
160 170 180 190 200
LWYEPIYNVT KAALMMFSKT LATEVIKDNI RVNCINPGLI LTPDWIKTAK
210 220 230 240 250
ELTKDNGGDW KGYLQSVADE HAPIKRFASP EELANFFVFL CSERATYSVG
260
SAYFVDGGML KTL
Length:263
Mass (Da):28,321
Last modified:May 15, 2007 - v1
Checksum:iADEE61E15FCCF92E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB192961 Genomic DNA. Translation: BAF56569.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB192961 Genomic DNA. Translation: BAF56569.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3AI1X-ray2.38A/B1-263[»]
3AI2X-ray1.90A/B/C/D/E/F/G/H1-263[»]
3AI3X-ray1.80A/C/E/G1-263[»]
ProteinModelPortaliA4PB64.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi1.1.1.289. 9012.

Miscellaneous databases

EvolutionaryTraceiA4PB64.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular properties of membrane-bound FAD-containing D-sorbitol dehydrogenase from thermotolerant Gluconobacter frateurii isolated from Thailand."
    Toyama H., Soemphol W., Moonmangmee D., Adachi O., Matsushita K.
    Biosci. Biotechnol. Biochem. 69:1120-1129(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The crystal structure of l-sorbose reductase from Gluconobacter frateurii complexed with NADPH and l-sorbose."
    Kubota K., Nagata K., Okai M., Miyazono K., Soemphol W., Ohtsuka J., Yamamura A., Saichana N., Toyama H., Matsushita K., Tanokura M.
    J. Mol. Biol. 407:543-555(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH NADP.

Entry informationi

Entry nameiA4PB64_9PROT
AccessioniPrimary (citable) accession number: A4PB64
Entry historyi
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 11, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.