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Protein
Submitted name:

cDNA, clone cssl:d0220

Gene

sc:d0220

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • identical protein binding Source: ZFIN

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA, clone cssl:d0220Imported
Gene namesi
Name:sc:d0220Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-080229-7. sc:d0220.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei230 – 250HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500267130924 – 251Sequence analysisAdd BLAST228

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself2EBI-1579664,EBI-1579664

GO - Molecular functioni

  • identical protein binding Source: ZFIN

Structurei

3D structure databases

ProteinModelPortaliA4JYP5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 216Ig-likeInterPro annotationAdd BLAST84

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000015757.
HOVERGENiHBG100295.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
PfamiView protein in Pfam
PF07686. V-set. 1 hit.
SMARTiView protein in SMART
SM00409. IG. 1 hit.
SUPFAMiSSF48726. SSF48726. 2 hits.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

A4JYP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKIIISKST LCLFLTLIYG VFGATDEFKS VSVTEGDSVT LNTGVSEVQK
60 70 80 90 100
TDQILWMFGP DEIRIAEIYK QSMDMFDSDE KFGDRLKMDS RTGSLTITNI
110 120 130 140 150
RNEHSGLYKL NIIGNRNSIK RFNVTVYAPL PVPVISNVHS NSSSSDSNCS
160 170 180 190 200
VLCSVANVSA VSLSWYKENS LLYSVSLSEF RISLFLPLEV EYQDKNTYSC
210 220 230 240 250
LVNNSITNRT TQLDISQLCQ RNKETSHAAI FHPGFISALV LPGLAAAVYF

L
Length:251
Mass (Da):27,912
Last modified:May 1, 2007 - v1
Checksum:i92D3406E4974E07F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU458966 mRNA. Translation: CAM73227.1.
RefSeqiNP_001108579.1. NM_001115107.1.
UniGeneiDr.77637.

Genome annotation databases

GeneIDi100141491.
KEGGidre:100141491.

Similar proteinsi

Entry informationi

Entry nameiA4JYP5_DANRE
AccessioniPrimary (citable) accession number: A4JYP5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: February 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)