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A4JR40 (A4JR40_BURVG) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1136 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A4JR40 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 6142BBAE8E311D85

FASTA1,136127,492
        10         20         30         40         50         60 
MKREDSLDDV RRAQFASVAP AGTARARRAR RREPALSTDD PLWYKDAIIY QVHVKSFYDS 

        70         80         90        100        110        120 
NNDGIGDFPG LIMKLDYIAE LGVDTIWLLP FYPSPRRDDG YDIADYRGVH PDYGTLADVR 

       130        140        150        160        170        180 
RFIREAHARG IRVIAELVIN HTSDQHPWFQ RARRAKPGST HRDYYVWSDT DTKYAGTRII 

       190        200        210        220        230        240 
FLDTETSNWT HDPVAGQYYW HRFYSHQPDL NFDNPAVVRE VIQVMRFWLD LGIDGLRLDA 

       250        260        270        280        290        300 
VPYLVEREGT NNENLPETHA ILKRIRATID AEYPNRMLLA EANQWPEDVQ EYFGNEDECH 

       310        320        330        340        350        360 
MAFHFPLMPR IYMSIASEDR FPILDIMRQT PALAPSNQWA VFLRNHDELT LEMVTDSERD 

       370        380        390        400        410        420 
LLWQTYASDR RARLNLGIRR RLAPLMERDR RRIELINSLL LSMPGTPVIY YGDELGMGDN 

       430        440        450        460        470        480 
IHLGDRDGVR TPMQWSSDRN GGFSRADPEL LVLPPVMGSL YGYDAINVEA QTRDPHSLLN 

       490        500        510        520        530        540 
WTRRILATRR ATQVFGRGTI RFLRPENRKV LAYLRELDGH EPVLCVANLS RASQAVELDL 

       550        560        570        580        590        600 
SEFAGRVPIE MTSDSPFPPI GQLTYLLTFP PYGFLWFVLS EHGREPSWRQ PQAEPLPEYV 

       610        620        630        640        650        660 
TIVMRRGEQR PDVGQLHTLA HDALSSWLTR RRWFASKDRK IGDARLNVVT PMPDEPFQYA 

       670        680        690        700        710        720 
EAWVTTHGGD VERYVVPLAA AWGGETSNPL FAQLALARVR RGHTVGYLTD AFALPAFGRG 

       730        740        750        760        770        780 
MLRMLRDGAT VPTSDGGRLE FLPEQALAAL DPGDDAEVRW LAAEQSNSSL VIGDAIVLKL 

       790        800        810        820        830        840 
VRKVAHGVHP EAEMSRYLTR IGYANTATLA GEVVHVDPDG TPHTVAILQR YVDNQGDAWT 

       850        860        870        880        890        900 
RSFDFLKRAI DELALPAVGD GEPAERDGEP DALLGYAAFA GVVGTRLGEL HVALAQPSDD 

       910        920        930        940        950        960 
AAFAPERATP EHVDGWCVDA IASFGHALDV LATRLDALDP SARDAAETLL ASRDAAVQAL 

       970        980        990       1000       1010       1020 
GALVPRTLDA VCTRIHGDFH LGQVLDVQGD ALLIDFEGEP ARALERRRAK SHPLRDVAGL 

      1030       1040       1050       1060       1070       1080 
LRSLSYVSAT AQFAIEKVPP QAAGRKRALF DRFGQAAADR FVECYRAAAE HAPERFVDPR 

      1090       1100       1110       1120       1130 
YADRLLALFL IDKASYELCY EAANRPDWLG VPVGGLAALV ERLLDAHAAS DHGGTR 

« Hide

References

[1]"Complete sequence of chromosome 3 of Burkholderia vietnamiensis G4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G4 / LMG 22486.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000616 Genomic DNA. Translation: ABO58743.1.
RefSeqYP_001114998.1. NC_009254.1.

3D structure databases

ProteinModelPortalA4JR40.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269482.Bcep1808_5813.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO58743; ABO58743; Bcep1808_5813.
GeneID4948717.
KEGGbvi:Bcep1808_5813.
PATRIC19312366. VBIBurVie89221_1203.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycBVIE269482:GJNA-5901-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4JR40_BURVG
AccessionPrimary (citable) accession number: A4JR40
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)