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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

Bcep1808_5342

Organism
Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia cepacia (strain R1808))
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

BioCyciBVIE269482:GJNA-5346-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:Bcep1808_5342Imported
OrganismiBurkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia cepacia (strain R1808))Imported
Taxonomic identifieri269482 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000002287 Componenti: Chromosome 2

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 42Sequence analysisAdd BLAST42
ChainiPRO_500267025143 – 679Sequence analysisAdd BLAST637

Interactioni

Protein-protein interaction databases

STRINGi269482.Bcep1808_5342

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini196 – 337Secretin_NInterPro annotationAdd BLAST142

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiCOG1450 LUCA
HOGENOMiHOG000214462
KOiK03219
OMAiKNGEARM
OrthoDBiPOG091H00DF

Family and domain databases

Gene3Di3.30.1370.120, 1 hit
InterProiView protein in InterPro
IPR005644 NolW-like
IPR038591 NolW-like_sf
IPR004846 T2SS/T3SS
IPR004845 T2SS_GspD_CS
IPR003522 T3SS_OM_pore_YscC
PfamiView protein in Pfam
PF00263 Secretin, 1 hit
PF03958 Secretin_N, 1 hit
PRINTSiPR01337 TYPE3OMGPROT
TIGRFAMsiTIGR02516 type_III_yscC, 1 hit
PROSITEiView protein in PROSITE
PS00875 T2SP_D, 1 hit

Sequencei

Sequence statusi: Complete.

A4JPT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRRVAPIRI QPRRLQRAAF AMCATALLAA ALCMTVAQPA RAADLRWRNK
60 70 80 90 100
PFTIVANGKK IGDFIRELAS SQGVTAVVDP KVDGVISGRF SGTPQQTLDT
110 120 130 140 150
ICSTYGLTWY YDGSFLYVDP ADQSQTQMIP IPPNAAGEIG RALQAMQIPD
160 170 180 190 200
KRYTLVINDR ANSVYVAGPR RYVELVRQAV GSVGDPSANG AHADIRAFRL
210 220 230 240 250
KYGWASDFTI NRSGKEVTVP GVASILRRLF GRDGSTSALP SSTPLGQAAR
260 270 280 290 300
QVKLGSGLTI AVPRLDFPDI SSGPRQGGYG GADSAAGGIS PFSAGGGGDA
310 320 330 340 350
LPQIVADPAI NAVIVRDLPE NMYRYQSLID QLDERPRIVE INVTIIDINE
360 370 380 390 400
DSLDSLGIDW RLHTTHGDVQ IGNGQNPLNG NTQYNGAGNP PLTFGIGASE
410 420 430 440 450
TGQTGTFMPT GIALTASIGG SLRNYLLTRV NALAQKGQAQ LRSKPKVLAL
460 470 480 490 500
DNTEAILENL TQFYVQVQGY QDSSLYSVTT GTSIKVTPMI VDEAIRHAAA
510 520 530 540 550
VSGTPQSVMM SIDIQDGNIV PGQAVSNVPV IQQRNIVTKT MIDEGKSLLI
560 570 580 590 600
AGFNDDEVRL NKSGVPWLSD IPLIGNLFKY TDKSGNHMER FYLLTPRVVT
610 620 630 640 650
NASMYAPDGS PVNPGADAPA DPNAMSMYRP PDNDVAVPLT PRPLPGTKFG
660 670
PPALPPPPDA ASQPVAATAG APAHVDDHH
Length:679
Mass (Da):72,333
Last modified:May 1, 2007 - v1
Checksum:i0BF494FBDDF97DBE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000615 Genomic DNA Translation: ABO58290.1

Genome annotation databases

EnsemblBacteriaiABO58290; ABO58290; Bcep1808_5342
KEGGibvi:Bcep1808_5342

Similar proteinsi

Entry informationi

Entry nameiA4JPT7_BURVG
AccessioniPrimary (citable) accession number: A4JPT7
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: March 28, 2018
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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