Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4JND9 (A4JND9_BURVG) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length570 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABO57792.1
   Molecular functionGlycosidase EMBL ABO57792.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionlevanase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4848 Potential EMBL ABO57792.1
Chain49 – 570522 Potential EMBL ABO57792.1
PRO_5000232453

Sequences

Sequence LengthMass (Da)Tools
A4JND9 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 8ED5D7C3DE19165D

FASTA57061,304
        10         20         30         40         50         60 
MQPAPAACAL LSRPARRRPA SRMTSTFPCL FLRLAGLLLA CSAGVQAASA ACTAAPADGT 

        70         80         90        100        110        120 
PQWRPAFHYT PQRNWMNDPN GLVYENGRYH LFYQYNPLGA DWGNMSWGHA TSTDLVHWHE 

       130        140        150        160        170        180 
QPVAMRANAT EEIFSGSIVA DPHNTSGLGT PGDTPLIAVY TSVYKEGSGH PPGTQAQSIA 

       190        200        210        220        230        240 
YSLDHGASWQ PYAHNPVLTL DPESKAFRDP KVSWYAPGRY WLMTTVVADA QVVKLYRSDD 

       250        260        270        280        290        300 
LIHWSFLSDF TLPGVPHTGA LWEMPDLVPL PVDDDPRHIK WVMIVNVNPW SIAGGSGAMY 

       310        320        330        340        350        360 
FVGEFDGRTF VPDRVAPAGS DPAQFRWVDH GADFYAAGTF SGAPGRRPLA IAWMSNWDYA 

       370        380        390        400        410        420 
AKSPTAPWRG AMTLPRELAL KAIDGEPTLV VTPAAAFTGW ADRRPAVHVG TLEVDSAARA 

       430        440        450        460        470        480 
LPPATRGVAQ RIEVTIAPGQ AARAGVVVRA SADGAIGTRI VYDTAARTLT LDRSRSGTPD 

       490        500        510        520        530        540 
FAATFSRQHI VALPLENGLL RLDIIVDRGS VEVFANGGRT VLTDVVFPPA DADRVSVFAE 

       550        560        570 
RGTATFSGLT VTPLGARDRA GEGDCVASAR

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia vietnamiensis G4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G4 / LMG 22486.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000615 Genomic DNA. Translation: ABO57792.1.
RefSeqYP_001117257.1. NC_009255.1.

3D structure databases

ProteinModelPortalA4JND9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4JND9.

Protein family/group databases

CAZyGH32. Glycoside Hydrolase Family 32.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4951053.
GenomeReviewsGene locus Bcep1808_4835 in contig CP000615_GR.
KEGGbvi:Bcep1808_4835.
PATRIC19317100. VBIBurVie89221_3564.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1621.
HOGENOMHBG693902.
OMAPRELSLY.
ProtClustDBCLSK930041.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 2 hits.
KOK01212.
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
PROSITEPS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4JND9_BURVG
AccessionPrimary (citable) accession number: A4JND9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info