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A4JBQ1 (A4JBQ1_BURVG) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase domain protein EMBL ABO53704.1
Gene names
Ordered Locus Names:Bcep1808_0692
OrganismBurkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia cepacia (strain R1808)) [Complete proteome] [HAMAP]
Taxonomic identifier269482 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length232 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue361N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
A4JBQ1 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 229ECFDFAA4FB2C7

FASTA23224,844
        10         20         30         40         50         60 
MSDLAARLDS VHRRIADAAR AAGRDPATVS LLAVSKTFPA DDVRAAHAAG QRAFGENYVQ 

        70         80         90        100        110        120 
ESIDKIDALA DLRSALEWHF IGPLQSNKTR AVAERFDWVH SVDRLKIAQR LSEQRPPQLP 

       130        140        150        160        170        180 
PLNVCIQVNI SGEESKSGVA PADVAELARA VAALPALRLR GLMAIPEPAG DTDAQRAPHR 

       190        200        210        220        230 
ALHALFDTLR AHGLALDTLS MGMSADLEAA VLEGATIVRV GTAIFGARDY SH

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia vietnamiensis G4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Tiedje J., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G4 / LMG 22486.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000614 Genomic DNA. Translation: ABO53704.1.
RefSeqYP_001118539.1. NC_009256.1.

3D structure databases

ProteinModelPortalA4JBQ1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4JBQ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4952387.
GenomeReviewsGene locus Bcep1808_0692 in contig CP000614_GR.
KEGGbvi:Bcep1808_0692.
PATRIC19319819. VBIBurVie89221_4900.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0325.
HOGENOMHBG289671.
OMAAENREQE.
ProtClustDBCLSK942070.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4JBQ1_BURVG
AccessionPrimary (citable) accession number: A4JBQ1
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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