A4JBA9 (A4JBA9_BURVG) Unreviewed, UniProtKB/TrEMBL
Last modified
May 29, 2013.
Version 49.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Dephospho-CoA kinase EC=2.7.1.24 HAMAP-Rule MF_00376 Alternative name(s): Dephospho-CoA kinase HAMAP-Rule MF_00376 Dephosphocoenzyme A kinase HAMAP-Rule MF_00376 | ||||
| Gene names |
| ||||
| Organism | Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia cepacia (strain R1808)) [Complete proteome] [HAMAP] EMBL ABO53562.1 | ||||
| Taxonomic identifier | 269482 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › ![]() |
Protein attributes
| Sequence length | 202 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A By similarity. HAMAP-Rule MF_00376 |
| Catalytic activity | ATP + 3'-dephospho-CoA = ADP + CoA. HAMAP-Rule MF_00376 |
| Pathway | Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 5/5. HAMAP-Rule MF_00376 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_00376. |
| Sequence similarities | Belongs to the CoaE family. HAMAP-Rule MF_00376 Contains 1 DPCK (dephospho-CoA kinase) domain. HAMAP-Rule MF_00376 SAAS SAAS001977 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Coenzyme A biosynthesis HAMAP-Rule MF_00376 |
| Cellular component | Cytoplasm HAMAP-Rule MF_00376 |
| Ligand | ATP-binding HAMAP-Rule MF_00376 SAAS SAAS001977 Nucleotide-binding |
| Molecular function | Kinase HAMAP-Rule MF_00376 EMBL ABO53562.1 Transferase |
| Technical term | 3D-structure PDB 4I1U PDB 4I1V Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | coenzyme A biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP dephospho-CoA kinase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Domain | 3 – 201 | 199 | DPCK By similarity HAMAP-Rule MF_00376 | ||||||
| Nucleotide binding | 8 – 15 | 8 | ATP By similarity HAMAP-Rule MF_00376 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequence of chromosome 1 of Burkholderia vietnamiensis G4." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. Richardson P.Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: G4 / LMG 22486. |
| [2] | "Apo crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis." Seattle Structural Genomics Center for Infectious Disease (SSGCID) Edwards T.E., Abendroth J. Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS). |
| [3] | "Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP." Seattle Structural Genomics Center for Infectious Disease (SSGCID) Edwards T.E., Clifton M.C., Sankaran B. Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS). |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | CP000614 Genomic DNA. Translation: ABO53562.1. | ||||||||||||||||||
| RefSeq | YP_001118397.1. NC_009256.1. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | A4JBA9. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| STRING | 269482.Bcep1808_0550. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| EnsemblBacteria | ABO53562; ABO53562; Bcep1808_0550. | ||||||||||||||||||
| GeneID | 4952243. | ||||||||||||||||||
| KEGG | bvi:Bcep1808_0550. | ||||||||||||||||||
| PATRIC | 19319514. VBIBurVie89221_4749. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CMR | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | COG0237. | ||||||||||||||||||
| HOGENOM | HOG000020769. | ||||||||||||||||||
| KO | K00859. | ||||||||||||||||||
| OMA | QRLACQM. | ||||||||||||||||||
| ProtClustDB | PRK00081. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| BioCyc | BVIE269482:GJNA-570-MONOMER. | ||||||||||||||||||
| UniPathway | UPA00241; UER00356. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| HAMAP | MF_00376. Dephospho_CoA_kinase. | ||||||||||||||||||
| InterPro | IPR001977. Depp_CoAkinase. IPR027417. P-loop_NTPase. [Graphical view] | ||||||||||||||||||
| Pfam | PF01121. CoaE. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF52540. SSF52540. 1 hit. | ||||||||||||||||||
| TIGRFAMs | TIGR00152. TIGR00152. 1 hit. | ||||||||||||||||||
| PROSITE | PS51219. DPCK. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Entry information
| Entry name | A4JBA9_BURVG | ||||||||
| Accession | Primary (citable) accession number: A4JBA9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
