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A4J5F6 (A4J5F6_DESRM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.3.1.9 EMBL ABO50309.1
Gene names
Ordered Locus Names:Dred_1784
OrganismDesulfotomaculum reducens (strain MI-1) [Complete proteome] [HAMAP]
Taxonomic identifier349161 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfotomaculum

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the thiolase family. RuleBase RU003557

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A4J5F6 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 127A81E9629EF3DE

FASTA39440,944
        10         20         30         40         50         60 
MSKREVVIVS AVRTPIGSFG GTLCNIPAAE LGAIAVKEAL QRIGLDGKDV DEVILGNVIQ 

        70         80         90        100        110        120 
AAQGQNPARQ ASLKAGIPIE VPAYAVNMVC GSGLKTVAMA ANDIICGEAE IVVAGGFENM 

       130        140        150        160        170        180 
SIAPYAIEKA RYGYRMGDGK IVDTMIKDGL TCAFNHYHMG ITAENIAERY GLTREAQDNF 

       190        200        210        220        230        240 
ALASQQKAIA AIDRGAFKEE IVPVVIPQRK GDPKIFDTDE FPRRGTTIEG LSKLKPAFKK 

       250        260        270        280        290        300 
DGTVTAGNAS GINDGAAALV VMSAEKAAQL GLKPMATILS GGSAGVDPSV MGLGPIPASR 

       310        320        330        340        350        360 
KALAKAGMTV DQMDLIEANE AFAAQSLAVV KDLELPTEKV NVNGGAIAIG HPVGASGARI 

       370        380        390 
LVTLLYEMKR RDSRFGLATL CIGGGQGQAL VVAR 

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References

[1]"Complete sequence of Desulfotomaculum reducens MI-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Tebo B.M., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MI-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000612 Genomic DNA. Translation: ABO50309.1.
RefSeqYP_001113134.1. NC_009253.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA4J5F6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4956343.
GenomeReviewsGene locus Dred_1784 in contig CP000612_GR.
KEGGdrm:Dred_1784.
PATRIC21729767. VBIDesRed82656_1957.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0183.
HOGENOMHBG370930.
OMARQVAITA.
PhylomeDBA4J5F6.
ProtClustDBCLSK2537073.

Family and domain databases

InterProIPR002155. Thiolase.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
IPR020615. Thiolase_acyl_enz_int_AS.
IPR020610. Thiolase_AS.
IPR020617. Thiolase_C.
IPR020613. Thiolase_CS.
IPR020616. Thiolase_N.
[Graphical view]
Gene3DG3DSA:3.40.47.10. Thiolase-like_subgr. 4 hits.
KOK00626.
PANTHERPTHR18919. Thiolase. 1 hit.
PfamPF02803. Thiolase_C. 1 hit.
PF00108. Thiolase_N. 1 hit.
[Graphical view]
PIRSFPIRSF000429. Ac-CoA_Ac_transf. 1 hit.
SUPFAMSSF53901. Thiolase-like. 2 hits.
TIGRFAMsTIGR01930. AcCoA-C-Actrans. 1 hit.
PROSITEPS00098. THIOLASE_1. 1 hit.
PS00737. THIOLASE_2. 1 hit.
PS00099. THIOLASE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4J5F6_DESRM
AccessionPrimary (citable) accession number: A4J5F6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)