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A4J4I5 (A4J4I5_DESRM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha amylase, catalytic region EMBL ABO49988.1
Gene names
Ordered Locus Names:Dred_1458
OrganismDesulfotomaculum reducens (strain MI-1) [Complete proteome] [HAMAP]
Taxonomic identifier349161 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfotomaculum

Protein attributes

Sequence length651 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4J4I5 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 65741FEC52FD9031

FASTA65176,012
        10         20         30         40         50         60 
MNVWIYHNSH EVYYRNPFGA VSCDERVILS LTIEIEEEAH SIFLRLWKHG REEEKIPMRL 

        70         80         90        100        110        120 
REGHGNKKTY QVEINVPSVQ GLLWYYFIIG IKDKTYYYGN NYDQLGGIGE IYEHEPPSYQ 

       130        140        150        160        170        180 
ITVYKRNLVT PNWFKDAVMY QIFVDRFCNG YEAGQVLNPK EHCIIYPHWD ATPQYGKCPE 

       190        200        210        220        230        240 
TGKTVCYDFF GGNLLGVIKK LPYLKELGIR VIYFNPIFEA ASNHKYDTGD YKKIDPMFGD 

       250        260        270        280        290        300 
HGVFQELCKK AQEMGISIIL DGVFSHTGSN SRYFNRDGQY PSLGAYQSKD SPYYSWYRFT 

       310        320        330        340        350        360 
HFPNEYDCWW GIDTLPNVNE LDPSYQEYII TGEDSVIKHW MRMGAKGWRL DVVDELPPEF 

       370        380        390        400        410        420 
IKKIRSVMKH LDPESILIGE VWEDATNKVS YGQMREYLLG EELDSVMNYP FRNIWLEYLL 

       430        440        450        460        470        480 
GKRDARSTHL RLMNLFENYP LHHFYSTMNL ISSHDVSRAL TVLSDAPPED MLSREEQAKV 

       490        500        510        520        530        540 
QLSEIQLERG LARLKLLSLL QMTFPGVPCI YYGDEVGMHG YRDPLNRGTY PWGKENSDLL 

       550        560        570        580        590        600 
AWYKKLIALR NEYEVLRTGL WRPIYMQGQI YGYLRVIKQG KDVFNRPAKN HVALVLVNPG 

       610        620        630        640        650 
RESAVEVSIP LKNWCNGTMM DLLQVDKTYK IENGLLHVKL EPLQGTLLID R

« Hide

References

[1]"Complete sequence of Desulfotomaculum reducens MI-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Tebo B.M., Richardson P.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MI-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000612 Genomic DNA. Translation: ABO49988.1.
RefSeqYP_001112813.1. NC_009253.1.

3D structure databases

ProteinModelPortalA4J4I5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4J4I5.

Protein family/group databases

CAZyCBM34. Carbohydrate-Binding Module Family 34.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4957159.
GenomeReviewsGene locus Dred_1458 in contig CP000612_GR.
KEGGdrm:Dred_1458.
PATRIC21729069. VBIDesRed82656_1611.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHBG304832.
OMAHDNEETS.
PhylomeDBA4J4I5.
ProtClustDBCLSK853548.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4J4I5_DESRM
AccessionPrimary (citable) accession number: A4J4I5
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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