A4J160 (A4J160_DESRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative endoribonuclease L-PSP EMBL ABO48813.1

Gene names

Ordered Locus Names:

Dred_0264

Organism

Desulfotomaculum reducens (strain MI-1) [Complete proteome] [HAMAP] EMBL ABO48813.1

Taxonomic identifier

349161 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfotomaculum › Desulfotomaculum reducens

Protein attributes

Sequence length	122 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	deaminase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4J160 [UniParc]. Last modified May 1, 2007. Version 1. Checksum: F70A1006EFC85D93	FASTA	122	12,835
	10 20 30 40 50 60 MKEIKTINAP GAIGPYSQGF ISNGMVYTSG QIPVNPANGE VPEGISAQAE QSCKNVGALL 70 80 90 100 110 120 ESAGIGFANV VKTTCFLVDM ADFAAFNEVY ARYFISKPAR SCVAVKELPK GVLCEIEAVA EL

References

[1]

"Complete sequence of Desulfotomaculum reducens MI-1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Tebo B.M., Richardson P. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MI-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000612 Genomic DNA. Translation: ABO48813.1.
RefSeq	YP_001111638.1. NC_009253.1.
3D structure databases
ProteinModelPortal	A4J160.
ModBase	Search...
Protein-protein interaction databases
STRING	349161.Dred_0264.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABO48813; ABO48813; Dred_0264.
GeneID	4958139.
KEGG	drm:Dred_0264.
PATRIC	21726330. VBIDesRed82656_0274.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0251.
HOGENOM	HOG000267215.
KO	K07567.
OMA	EVEAIAF.
ProtClustDB	CLSK950641.
Enzyme and pathway databases
BioCyc	DRED349161:GHP6-290-MONOMER.
Family and domain databases
Gene3D	3.30.1330.40. 1 hit.
InterPro	IPR013813. Endoribo_LPSP/chorism_mut-like. IPR006056. YjgF-like. IPR006175. YjgF/Yer057p/UK114. [Graphical view]
PANTHER	PTHR11803. PTHR11803. 1 hit.
Pfam	PF01042. Ribonuc_L-PSP. 1 hit. [Graphical view]
SUPFAM	SSF55298. YjgF/chorismate_mutase-like. 1 hit.
TIGRFAMs	TIGR00004. TIGR00004. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4J160_DESRM

Accession

Primary (citable) accession number: A4J160

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2007
Last sequence update:	May 1, 2007
Last modified:	May 29, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)