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A4ITV2 (A4ITV2_GEOTN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GTNG_3419 EMBL ABO68756.1
OrganismGeobacillus thermodenitrificans (strain NG80-2) [Complete proteome] [HAMAP] EMBL ABO68756.1
Taxonomic identifier420246 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length658 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
A4ITV2 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: CD529279364A5D01

FASTA65873,706
        10         20         30         40         50         60 
MSHFYERKTY RYPSYALAAL AVLMAVSLFY FQWMLGLVGL LGVGFLLYYV IWSQRSLHKE 

        70         80         90        100        110        120 
LQQYISNLSY RVKKVSEEAL MQMPIGILLL DEEDKIEWSN RFLAACFKEQ TLIGRSLAEL 

       130        140        150        160        170        180 
SEPLAAFVKK GKTDEEIIEL NGKQLKVIVH RHERLLYFFD VTEHMELRRR YEIERLVLAI 

       190        200        210        220        230        240 
IFLDNYDEIT QGMDDQAKSQ MNSLVTSVLN RWANDYGIFL KRTSSDRFIA VLNEHILTQL 

       250        260        270        280        290        300 
EKSKFSILDE VREQTAKHQA QITLSIGIGA GVSSLPELGT LAQSSLDLAL GRGGDQVAIK 

       310        320        330        340        350        360 
QGNGKVKFYG GKTNPMEKRT RVRARVISHA LRELIAESDK VLIMGHKYPD MDALGAAIGI 

       370        380        390        400        410        420 
LKVVQSNQKE GFLVVDAMKT DAGAQRLLEE MKKQADLWAR CIKPEQALEL ITEDTLLIVV 

       430        440        450        460        470        480 
DTHRPSLVIE ERLLYRADHI VVIDHHRRGE EFIEAPILVY MEPYASSTSE LVTELLEYQP 

       490        500        510        520        530        540 
KRVKLSMLEA TALLAGIVVD TKSFTLRTGS RTFDAASYLR AQGADTVLVQ KLLRESVANY 

       550        560        570        580        590        600 
VKRAKLIERA AIDEHGIAIA KGDENEVHDQ VLIAQTADTL LTLSGVVASF VISKRGDGTV 

       610        620        630        640        650 
GISARSLGDV NVQVIMERLG GGGHLTNAAA QLSDVTVGEA EQQLREAIHD YFEGGKPV 

« Hide

References

« Hide 'large scale' references
[1]"Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NG80-2 EMBL ABO68756.1.
[2]"Solution structure of the PAS domain of a thermophilic YybT protein homolog reveals a potential ligand-binding site."
Tan E., Rao F., Pasunooti S., Pham T.H., Soehano I., Turner M.S., Liew C.W., Lescar J., Pervushin K., Liang Z.X.
J. Biol. Chem. 288:11949-11959(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY NMR OF 55-162.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000557 Genomic DNA. Translation: ABO68756.1.
RefSeqYP_001127501.1. NC_009328.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2M1CNMR-A/B55-162[»]
ProteinModelPortalA4ITV2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING420246.GTNG_3419.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO68756; ABO68756; GTNG_3419.
GeneID4968341.
KEGGgtn:GTNG_3419.
PATRIC21983503. VBIGeoThe136879_3594.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3887.
HOGENOMHOG000112075.
OMAGMQFFAS.
OrthoDBEOG6FBX0G.

Enzyme and pathway databases

BioCycGTHE420246:GIXT-3511-MONOMER.

Family and domain databases

InterProIPR000160. GGDEF_dom.
IPR003156. Pesterase_DHHA1.
IPR001667. Pesterase_RecJ.
IPR014528. Signal_transd_YybT.
[Graphical view]
PfamPF01368. DHH. 1 hit.
PF02272. DHHA1. 1 hit.
[Graphical view]
PIRSFPIRSF026583. YybT. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4ITV2_GEOTN
AccessionPrimary (citable) accession number: A4ITV2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)