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A4ITV2

- A4ITV2_GEOTN

UniProt

A4ITV2 - A4ITV2_GEOTN

Protein
Submitted name:

DHH subfamily 1 protein

Gene

GTNG_3419

Organism
Geobacillus thermodenitrificans (strain NG80-2)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (01 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. hydrolase activity Source: InterPro
    2. manganese ion binding Source: InterPro
    3. nucleic acid binding Source: InterPro

    Enzyme and pathway databases

    BioCyciGTHE420246:GIXT-3511-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DHH subfamily 1 proteinImported
    Gene namesi
    Ordered Locus Names:GTNG_3419Imported
    OrganismiGeobacillus thermodenitrificans (strain NG80-2)Imported
    Taxonomic identifieri420246 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
    ProteomesiUP000001578: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi420246.GTNG_3419.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2M1CNMR-A/B55-162[»]
    ProteinModelPortaliA4ITV2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3887.
    HOGENOMiHOG000112075.
    OMAiGMQFFAS.
    OrthoDBiEOG6FBX0G.

    Family and domain databases

    InterProiIPR001667. DDH_dom.
    IPR003156. DHHA1_dom.
    IPR000160. GGDEF_dom.
    IPR014528. Signal_transd_YybT.
    [Graphical view]
    PfamiPF01368. DHH. 1 hit.
    PF02272. DHHA1. 1 hit.
    [Graphical view]
    PIRSFiPIRSF026583. YybT. 1 hit.
    PROSITEiPS50887. GGDEF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4ITV2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSHFYERKTY RYPSYALAAL AVLMAVSLFY FQWMLGLVGL LGVGFLLYYV    50
    IWSQRSLHKE LQQYISNLSY RVKKVSEEAL MQMPIGILLL DEEDKIEWSN 100
    RFLAACFKEQ TLIGRSLAEL SEPLAAFVKK GKTDEEIIEL NGKQLKVIVH 150
    RHERLLYFFD VTEHMELRRR YEIERLVLAI IFLDNYDEIT QGMDDQAKSQ 200
    MNSLVTSVLN RWANDYGIFL KRTSSDRFIA VLNEHILTQL EKSKFSILDE 250
    VREQTAKHQA QITLSIGIGA GVSSLPELGT LAQSSLDLAL GRGGDQVAIK 300
    QGNGKVKFYG GKTNPMEKRT RVRARVISHA LRELIAESDK VLIMGHKYPD 350
    MDALGAAIGI LKVVQSNQKE GFLVVDAMKT DAGAQRLLEE MKKQADLWAR 400
    CIKPEQALEL ITEDTLLIVV DTHRPSLVIE ERLLYRADHI VVIDHHRRGE 450
    EFIEAPILVY MEPYASSTSE LVTELLEYQP KRVKLSMLEA TALLAGIVVD 500
    TKSFTLRTGS RTFDAASYLR AQGADTVLVQ KLLRESVANY VKRAKLIERA 550
    AIDEHGIAIA KGDENEVHDQ VLIAQTADTL LTLSGVVASF VISKRGDGTV 600
    GISARSLGDV NVQVIMERLG GGGHLTNAAA QLSDVTVGEA EQQLREAIHD 650
    YFEGGKPV 658
    Length:658
    Mass (Da):73,706
    Last modified:May 1, 2007 - v1
    Checksum:iCD529279364A5D01
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000557 Genomic DNA. Translation: ABO68756.1.
    RefSeqiWP_011888454.1. NC_009328.1.
    YP_001127501.1. NC_009328.1.

    Genome annotation databases

    EnsemblBacteriaiABO68756; ABO68756; GTNG_3419.
    GeneIDi4968341.
    KEGGigtn:GTNG_3419.
    PATRICi21983503. VBIGeoThe136879_3594.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000557 Genomic DNA. Translation: ABO68756.1 .
    RefSeqi WP_011888454.1. NC_009328.1.
    YP_001127501.1. NC_009328.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2M1C NMR - A/B 55-162 [» ]
    ProteinModelPortali A4ITV2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 420246.GTNG_3419.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABO68756 ; ABO68756 ; GTNG_3419 .
    GeneIDi 4968341.
    KEGGi gtn:GTNG_3419.
    PATRICi 21983503. VBIGeoThe136879_3594.

    Phylogenomic databases

    eggNOGi COG3887.
    HOGENOMi HOG000112075.
    OMAi GMQFFAS.
    OrthoDBi EOG6FBX0G.

    Enzyme and pathway databases

    BioCyci GTHE420246:GIXT-3511-MONOMER.

    Family and domain databases

    InterProi IPR001667. DDH_dom.
    IPR003156. DHHA1_dom.
    IPR000160. GGDEF_dom.
    IPR014528. Signal_transd_YybT.
    [Graphical view ]
    Pfami PF01368. DHH. 1 hit.
    PF02272. DHHA1. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF026583. YybT. 1 hit.
    PROSITEi PS50887. GGDEF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
      Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
      Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NG80-2Imported.
    2. "Solution structure of the PAS domain of a thermophilic YybT protein homolog reveals a potential ligand-binding site."
      Tan E., Rao F., Pasunooti S., Pham T.H., Soehano I., Turner M.S., Liew C.W., Lescar J., Pervushin K., Liang Z.X.
      J. Biol. Chem. 288:11949-11959(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY NMR OF 55-162.

    Entry informationi

    Entry nameiA4ITV2_GEOTN
    AccessioniPrimary (citable) accession number: A4ITV2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2007
    Last sequence update: May 1, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3