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Protein
Submitted name:

Putative sigma-B regulator

Gene

GTNG_3373

Organism
Geobacillus thermodenitrificans (strain NG80-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciGTHE420246:GIXT-3465-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sigma-B regulatorImported
Gene namesi
Ordered Locus Names:GTNG_3373Imported
OrganismiGeobacillus thermodenitrificans (strain NG80-2)Imported
Taxonomic identifieri420246 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
Proteomesi
  • UP000001578 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei31 – 5525HelicalSequence analysisAdd
BLAST
Transmembranei67 – 8822HelicalSequence analysisAdd
BLAST
Transmembranei94 – 11320HelicalSequence analysisAdd
BLAST
Transmembranei134 – 15421HelicalSequence analysisAdd
BLAST
Transmembranei160 – 18324HelicalSequence analysisAdd
BLAST
Transmembranei195 – 21319HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi420246.GTNG_3373.

Structurei

3D structure databases

ProteinModelPortaliA4ITQ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini251 – 30858PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini331 – 38252PAC (PAS-associated C-terminal)InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili367 – 39630Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107SGM. Bacteria.
COG2208. LUCA.
HOGENOMiHOG000262236.
OMAiLEMMANA.
OrthoDBiPOG091H0DNP.

Family and domain databases

InterProiIPR033425. MASE3.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF17159. MASE3. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4ITQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLHSIAAVL ATTLFGVLLF AAGRLSFPPS FYHSIHLALG LAAVVVCWLV
60 70 80 90 100
AMQGWAVFPH TLSMERLVMG ALFFSSGSLF SFHFLLSFAD AGEASLFSLA
110 120 130 140 150
ARFTIAWGLL FLFSRPDEVM ERHSGQRWQA FLMALVYTAA IGLLLHFTAS
160 170 180 190 200
LWLGDGTSRW PLWWQAGEGT VGLLDAAAAA IVWRRYRQGG SSSPLYWLMA
210 220 230 240 250
LLLFAFGQVL LMLGPGHVLW GQLYEVAGFL YVLRAMYVET IEKPYVELKQ
260 270 280 290 300
HEQQLEMMAN ALGEGLMMLD RDGQIVWMNP EAGRLLGVVP DEAKGKPLFS
310 320 330 340 350
FVSLAGPNGD AWDWKQLRYV VKRLKSGEVI RVEEESFCRY DGVCLPVSYT
360 370 380 390 400
LAPVIENGAL TGLVAVLRDM TEKKEKERLE REREQLDFEL SLAANMQRAL
410 420 430 440 450
LQTSSEANLP SYVDIGVLSV PARVLSGDFY RFSVHQTSVS VGIADVSGKG
460 470 480 490 500
IPAAMLMTLM KFILDRTVHY GTQPHVYLDL LNRFAYDYTE PSMFVTMFVG
510 520 530 540 550
NYNEKTHVFS YACAGHEPAL LYRAKTKQCV PLHAKGCALG LFPQFSFETK
560 570 580 590 600
SVALEPGDFV LLYTDGVTEK RGEEVADGFS VLASMVTRTN LDQPASQVVH
610 620
DLYEQVKAYH QYEQKDDQTL LLLRRR
Length:626
Mass (Da):69,993
Last modified:May 1, 2007 - v1
Checksum:i353015983CC97EC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000557 Genomic DNA. Translation: ABO68710.1.

Genome annotation databases

EnsemblBacteriaiABO68710; ABO68710; GTNG_3373.
KEGGigtn:GTNG_3373.
PATRICi21983407. VBIGeoThe136879_3546.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000557 Genomic DNA. Translation: ABO68710.1.

3D structure databases

ProteinModelPortaliA4ITQ6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi420246.GTNG_3373.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO68710; ABO68710; GTNG_3373.
KEGGigtn:GTNG_3373.
PATRICi21983407. VBIGeoThe136879_3546.

Phylogenomic databases

eggNOGiENOG4107SGM. Bacteria.
COG2208. LUCA.
HOGENOMiHOG000262236.
OMAiLEMMANA.
OrthoDBiPOG091H0DNP.

Enzyme and pathway databases

BioCyciGTHE420246:GIXT-3465-MONOMER.

Family and domain databases

InterProiIPR033425. MASE3.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF17159. MASE3. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA4ITQ6_GEOTN
AccessioniPrimary (citable) accession number: A4ITQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: September 7, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.