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A4IT24 (A4IT24_GEOTN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GTNG_3133
OrganismGeobacillus thermodenitrificans (strain NG80-2) [Complete proteome] [HAMAP]
Taxonomic identifier420246 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A4IT24 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 84A1275684E41C02

FASTA44749,243
        10         20         30         40         50         60 
MEKRLKIATI GGGSSYTPEL VEGLIKRYHE LPVGELWLVD VPEGKEKLEI VGALAKRMVE 

        70         80         90        100        110        120 
KAGVPIEIHL TLDRRRALEG ADFVTTQFRV GGLEARAKDE RIPLKYGVIG QETNGPGGLF 

       130        140        150        160        170        180 
KGLRTIPVIL DIIRDMEELC PEAWLINFTN PAGMVTEAVL RYTKRDKVVG LCNVPIGMHM 

       190        200        210        220        230        240 
GVAKLLGVDA DRVHIDFAGL NHMVFGLHVY LDGVEVTEKV IDLVANPDRS GVTMKNIVDL 

       250        260        270        280        290        300 
GWEPDFLKGL KVLPCPYHRY YFQTDKMLAE ELEAAKTKGT RAEVVQQLEK ELFELYKDPN 

       310        320        330        340        350        360 
LAIKPPQLEQ RGGAYYSDAA CSLISSIYND KRDIQPVNTR NNGAIASIPS ESAVEVNCVI 

       370        380        390        400        410        420 
TKEGPKPIAV GDLPVAVRGL VQQIKSFERV AAEAAVTGDY QTALVAMTIN PLVPSDTVAK 

       430        440 
QILDEMLEAH KEHLPQFFKQ AKTVAGN 

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References

[1]"Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed: 17372208] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000557 Genomic DNA. Translation: ABO68478.1.
RefSeqYP_001127223.1. NC_009328.1.

3D structure databases

ProteinModelPortalA4IT24.
SMRA4IT24. Positions 4-442.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4IT24.

Protein family/group databases

CAZyGH4. Glycoside Hydrolase Family 4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4968059.
GenomeReviewsGene locus GTNG_3133 in contig CP000557_GR.
KEGGgtn:GTNG_3133.
NMPDRfig|420246.5.peg.3006.
PATRIC21982907. VBIGeoThe136879_3296.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1486.
HOGENOMHBG511715.
OMAAKDERIP.
PhylomeDBA4IT24.
ProtClustDBCLSK2767025.

Family and domain databases

InterProIPR019802. GlycHydrolase_4_CS.
IPR001088. Glyco_hydro_4.
IPR022616. Glyco_hydro_4_C.
IPR015955. Lactate_DH/Glyco_Ohase_4_C.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.90.110.10. lact_mal_DH. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK01222.
PfamPF02056. Glyco_hydro_4. 1 hit.
PF11975. Glyco_hydro_4C. 1 hit.
[Graphical view]
PRINTSPR00732. GLHYDRLASE4.
SUPFAMSSF56327. Lactate_DH/Glyco_hydro_4_C. 1 hit.
PROSITEPS01324. GLYCOSYL_HYDROL_F4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4IT24_GEOTN
AccessionPrimary (citable) accession number: A4IT24
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)