Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4IQM0 (A4IQM0_GEOTN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:GTNG_2275
OrganismGeobacillus thermodenitrificans (strain NG80-2) [Complete proteome] [HAMAP]
Taxonomic identifier420246 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
A4IQM0 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: E243A282BBA86677

FASTA47853,009
        10         20         30         40         50         60 
MATANTNSKV RIERDFLGDK EVPIDAYYGI QTLRALENFP ITGYRIHKEL IKALAMVKKA 

        70         80         90        100        110        120 
AALANMDTKR LKAEIGEAIV KAADEIIAGK WHEHFIVDPI QGGAGTSINM NANEVIANRA 

       130        140        150        160        170        180 
LELLGYEKGE YGYLSPNNHV NMSQSTNDVF PTAVHIALLN LLDKLLHTMR YMHAVMKEKA 

       190        200        210        220        230        240 
RQFDHVIKIG RTHLQDAVPI RLGQEFEAYS CVLERDIQRI DRSRQYLYEI NMGATAVGTG 

       250        260        270        280        290        300 
LNADPRYIEG VVKYLSEISG LPLVRAEHLV DATQNTDAYT EVSSALKVCM INMSKIANDL 

       310        320        330        340        350        360 
RLMASGPRAG LGEITLPPRQ PGSSIMPGKV NPVMAEVINQ VAFQVIGNDH TICLASEAGQ 

       370        380        390        400        410        420 
LELNVMEPVL VFNLLQSITI MTNAFHVFTN YCLKGIEANE ERLRHYVEKS VSVVTAVSPY 

       430        440        450        460        470 
IGYETAARIA QQAILEGESI RKLCLQYGLL TEKELDHILD PYKMTSPGIL SVISFDKP 

« Hide

References

[1]"Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed: 17372208] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000557 Genomic DNA. Translation: ABO67624.1.
RefSeqYP_001126369.1. NC_009328.1.

3D structure databases

ProteinModelPortalA4IQM0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4IQM0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4967202.
GenomeReviewsGene locus GTNG_2275 in contig CP000557_GR.
KEGGgtn:GTNG_2275.
NMPDRfig|420246.5.peg.2183.
PATRIC21981077. VBIGeoThe136879_2400.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1027.
HOGENOMHBG284369.
OMAEGITANE.
PhylomeDBA4IQM0.
ProtClustDBPRK12273.

Family and domain databases

HAMAPMF_00743. FumaraseC.
[Tree]
InterProIPR004708. ApsA.
IPR003031. D_crystallin.
IPR005677. Fum_hydII.
IPR018951. Fumarase_C_C.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KOK01744.
PfamPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00839. AspA. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4IQM0_GEOTN
AccessionPrimary (citable) accession number: A4IQM0
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)