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A4IPC6 (A4IPC6_GEOTN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GTNG_1820 EMBL ABO67180.1
OrganismGeobacillus thermodenitrificans (strain NG80-2) [Complete proteome] [HAMAP] EMBL ABO67180.1
Taxonomic identifier420246 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length1044 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A4IPC6 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 9EF7E535041F3BEC

FASTA1,044122,019
        10         20         30         40         50         60 
MFLTEEKLEA RIHELSEHRY REAILIPKFR FLADEKGEVG ARLPETKEWG EITLGDYWRG 

        70         80         90        100        110        120 
RDVYAWLQAD IDIPKQWMGK EIVGLFDFGK TGGGNNSGFE SLLYLNGVPY QGVDSNHMEV 

       130        140        150        160        170        180 
FFPKDAAGSK LSLTFRLWSG LEGGGIPRAQ EHKIKRAEVA WLDEVIDDLF FTGKAILQTV 

       190        200        210        220        230        240 
KILDRHSPER QLLLSLLDRA FRQIDWSKPK SDSFYHSVAI ALQILKDELK KMEKKHPVTV 

       250        260        270        280        290        300 
RCVGHTHIDV AWLWRLKHTR EKAARSFSTV LRLMEKYPEY IFLQSQPQLY EYIKSDYPEI 

       310        320        330        340        350        360 
FEQIRKRVAE GRWEAGGAMW LEADCNIPSG ESLVRQLLTG TRFLRKEFGV ECKYLWLPDV 

       370        380        390        400        410        420 
FGYNWALPQI LKKSGIHTFM TTKISWNQYN RMPHDTFWWR GIDGSEVLTH FITTPEPNKD 

       430        440        450        460        470        480 
WWFYTYNGVI TPETVQGIWN SYRDKAINQE LLLSYGYGDG GGGVNREMLE MRRRLNDIPG 

       490        500        510        520        530        540 
LPNVETGRAD EFFERLHKKI KETDQYVHVW DGELYLEYHR GTYTSQAYNK RMNRKMELLY 

       550        560        570        580        590        600 
RETEWMGIVS TMLNADWSHY PFEQLNEGWK IILRNQFHDI IPGSSIREVY EDSKEEYETA 

       610        620        630        640        650        660 
EKYALSAWEN LSKSIIIQQE ESTVTVFNSS PWVRTDFIRV PVTAETKKGI WKDGSGKELK 

       670        680        690        700        710        720 
AERVGDHWVV LVEDVPPLGF STIRFYGEES GNTLAQTDLF HIGSSEMTSP HYKIKWNDKG 

       730        740        750        760        770        780 
RITSIYDFEA KREVLDDGKC GNVLQVFEDK PLRFDAWDID IFYQEKKREV EDLRRVSVKE 

       790        800        810        820        830        840 
ITPLYAIVHF EWGYMDSSIK QDMIVYAHSR RIDFKTEVDW KEQNQLLKVA FPVKIRSTLA 

       850        860        870        880        890        900 
TYDIQFGNVK RPTHWNTSWD YAKFETVAHQ WADLSETGYG VSLLNDCKYG YDIKDNVMRL 

       910        920        930        940        950        960 
SLIKSATYPD YKQDQGHHIF TYSLLPHVGD WVEGQTVKEA WYLNNPLTYR IGQPVKETFS 

       970        980        990       1000       1010       1020 
LFRVDANNIM IDAVKKAEDT NQIVLRLHEF TGRRGKVCIT SDLSITAWQE CDLMERGIGE 

      1030       1040 
KKTDATLEFD INPYEIKTFL IDLK 

« Hide

References

[1]"Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NG80-2 EMBL ABO67180.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000557 Genomic DNA. Translation: ABO67180.1.
RefSeqYP_001125925.1. NC_009328.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING420246.GTNG_1820.

Protein family/group databases

CAZyGH38. Glycoside Hydrolase Family 38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABO67180; ABO67180; GTNG_1820.
GeneID4966753.
KEGGgtn:GTNG_1820.
PATRIC21980107. VBIGeoThe136879_1922.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0383.
HOGENOMHOG000048425.
KOK01191.
OMACHYEDIR.
OrthoDBEOG6038T2.
ProtClustDBCLSK872825.

Enzyme and pathway databases

BioCycGTHE420246:GIXT-1897-MONOMER.

Family and domain databases

Gene3D1.20.1270.50. 1 hit.
2.60.40.1180. 1 hit.
3.20.110.10. 1 hit.
InterProIPR011013. Gal_mutarotase_SF_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR013780. Glyco_hydro_13_b.
IPR027291. Glyco_hydro_38/57_N.
IPR011682. Glyco_hydro_38_C.
IPR015341. Glyco_hydro_38_cen.
IPR000602. Glyco_hydro_38_N.
[Graphical view]
PfamPF09261. Alpha-mann_mid. 1 hit.
PF01074. Glyco_hydro_38. 1 hit.
PF07748. Glyco_hydro_38C. 1 hit.
[Graphical view]
SMARTSM00872. Alpha-mann_mid. 1 hit.
[Graphical view]
SUPFAMSSF74650. SSF74650. 1 hit.
SSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4IPC6_GEOTN
AccessionPrimary (citable) accession number: A4IPC6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: March 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)