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Protein
Submitted name:

Sigma factor sigB regulation protein RsbU-like protein

Gene

GTNG_0342

Organism
Geobacillus thermodenitrificans (strain NG80-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciGTHE420246:GIXT-390-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor sigB regulation protein RsbU-like proteinImported
Gene namesi
Ordered Locus Names:GTNG_0342Imported
OrganismiGeobacillus thermodenitrificans (strain NG80-2)Imported
Taxonomic identifieri420246 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000001578 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi420246.GTNG_0342.

Structurei

3D structure databases

ProteinModelPortaliA4IK70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000261739.
OMAiGEMINRR.
OrthoDBiEOG689HN0.

Family and domain databases

InterProiIPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF08447. PAS_3. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50113. PAC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4IK70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDEFLEYLR HHKNFTWREL FDRLEKMNML FGSNDYVYWL AAPDKRKILF
60 70 80 90 100
ISSSCEQLYG LPPAAFYHDE DIWMKISYPD DHAKAEAKWA LPWESKVSTQ
110 120 130 140 150
TYRIVNQRDG SVRWVLERMV PVLSEAEEGN LISGFVMDIT ETKRNRDEIR
160 170 180 190 200
LAEQVYASIE QAMLVTDDEF AVRFVNSAFT KITGHSTEVV GQPLHTLYAG
210 220 230 240 250
YYAAWFYEVI KNGIVESGQW QGRVRWRRKN GSVSVRRTTV RAVHNQEGNI
260 270 280 290 300
SFYLFLFSGL HETPYAEAMK DDLKLAREVQ KRVLSKPLSA NGIDIAGTYI
310 320 330 340 350
PSQELGGDMY AWYQIDNQRY GIFLMDVMGH GAAASLICMS VRSLLNGIIR
360 370 380 390 400
KAIVPQAVFY ELNRHMRQLY HENGQMTYYF TAVYVLVDVK KRMIEYASAG
410 420 430 440 450
HPPGFLFQPD GTVFELDRGC APIGLLPGLF VDSGQLRYES GATLVLYSDG
460 470 480 490 500
AIEGEAGSVR QNIETFRDTL APYVSLDERA LLACLRRHFI QKGSLRDDFS

AVVAKLR
Length:507
Mass (Da):58,035
Last modified:May 1, 2007 - v1
Checksum:iF7E68A556A4B63D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000557 Genomic DNA. Translation: ABO65724.1.
RefSeqiWP_008881249.1. NC_009328.1.

Genome annotation databases

EnsemblBacteriaiABO65724; ABO65724; GTNG_0342.
KEGGigtn:GTNG_0342.
PATRICi21976895. VBIGeoThe136879_0356.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000557 Genomic DNA. Translation: ABO65724.1.
RefSeqiWP_008881249.1. NC_009328.1.

3D structure databases

ProteinModelPortaliA4IK70.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi420246.GTNG_0342.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO65724; ABO65724; GTNG_0342.
KEGGigtn:GTNG_0342.
PATRICi21976895. VBIGeoThe136879_0356.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000261739.
OMAiGEMINRR.
OrthoDBiEOG689HN0.

Enzyme and pathway databases

BioCyciGTHE420246:GIXT-390-MONOMER.

Family and domain databases

InterProiIPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF08447. PAS_3. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50113. PAC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
    Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
    Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NG80-2Imported.

Entry informationi

Entry nameiA4IK70_GEOTN
AccessioniPrimary (citable) accession number: A4IK70
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: July 22, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.