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A4IJB4 (A4IJB4_GEOTN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Deoxyribonuclease TatD family EMBL ABO65418.1
Gene names
Ordered Locus Names:GTNG_0031
OrganismGeobacillus thermodenitrificans (strain NG80-2) [Complete proteome] [HAMAP]
Taxonomic identifier420246 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4IJB4 [UniParc].

Last modified May 1, 2007. Version 1.
Checksum: 612211AC22A3671A

FASTA25628,986
        10         20         30         40         50         60 
MLFDTHAHLN AVQYEEDLEQ VIERARAEGV SYIVVVGFDR LTIDRAIELA ERYPFIYAAV 

        70         80         90        100        110        120 
GWHPVDAIDM TDDDLQMIEQ LASHPKVVAL GEMGLDYHWD KSPKDVQQDV FRRQIALAKK 

       130        140        150        160        170        180 
VKLPIIIHNR EATADILKIL QEENAAEVGG IMHCFSGSVE VARQCIEMNF LISLGGPVTF 

       190        200        210        220        230        240 
KNAKKPKEVA KEIPLSHLLI ETDCPYLTPH PFRGKRNEPS YVKYVAEAIA EIKNVSFDEV 

       250 
AKTTMENAKR LFAIDR

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References

[1]"Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir."
Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., Tang Y., Liu X., Han W., Peng X., Liu R., Wang L.
Proc. Natl. Acad. Sci. U.S.A. 104:5602-5607(2007) [PubMed: 17372208] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000557 Genomic DNA. Translation: ABO65418.1.
RefSeqYP_001124163.1. NC_009328.1.

3D structure databases

ProteinModelPortalA4IJB4.
SMRA4IJB4. Positions 2-252.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4IJB4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4965157.
GenomeReviewsGene locus GTNG_0031 in contig CP000557_GR.
KEGGgtn:GTNG_0031.
NMPDRfig|420246.5.peg.30.
PATRIC21976167. VBIGeoThe136879_0033.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0084.
HOGENOMHBG629833.
OMALPLVIHT.
PhylomeDBA4IJB4.
ProtClustDBCLSK872601.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4IJB4_GEOTN
AccessionPrimary (citable) accession number: A4IJB4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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