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Protein

One cut domain family member

Gene

onecut1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi413 – 472HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
One cut domain family memberUniRule annotation
Gene namesi
Name:onecut1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-480152 onecut1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Structurei

3D structure databases

ProteinModelPortaliA4II00
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini276 – 362CUTInterPro annotationAdd BLAST87
Domaini411 – 471HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the CUT homeobox family.UniRule annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2252 Eukaryota
ENOG410YWY4 LUCA
HOVERGENiHBG005981
KOiK08026

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 1 hit
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 1 hit
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS51042 CUT, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A4II00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAQLTMDAI GDLHGISHES VPGTADLMGS SPHHRGSVTH RSNHLSAHPR
60 70 80 90 100
SMGMASILDG GDYHHHHHHH HRPPDHALTG PLHPTMTMAC DTPPGMSMSS
110 120 130 140 150
TYTTLTPLQP LPPISTVSDK FPHHHHHHHP HQRIPGNVSG SFTLMRDDRG
160 170 180 190 200
LASMNNLYSP YHKEVTGMGQ SLSPLSGSGL GSIHGAQQGP PHYAHPSAAM
210 220 230 240 250
PTEKMLTPNG FEAHHPAMLT RHGEQHLTPP SAGMVPINGI PHHPHAHLNA
260 270 280 290 300
QSHGQILAST RDQNPPSVTG SQINNGSNSG QMEEINTKEV AQRITTELKR
310 320 330 340 350
YSIPQAIFAQ RVLCRSQGTL SDLLRNPKPW SKLKSGRETF RRMWKWLQEP
360 370 380 390 400
EFQRMSALRL AALVPADPVF QHSGQLPADS LVKIGYPSQS TQSNHMSCKR
410 420 430 440 450
KEQEHGKDRG NTPKKPRLVF TDVQRRTLHA IFKENKRPSK ELQITISQQL
460 470 480 490
GLELSTVSNF FMNARRRSLD KWQDEGNSGS GNTSSSSSTC TKA
Length:493
Mass (Da):54,353
Last modified:May 1, 2007 - v1
Checksum:i0386A9E6ECB83B90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC135775 mRNA Translation: AAI35776.1
RefSeqiNP_001093730.1, NM_001100260.1
UniGeneiStr.28071

Genome annotation databases

GeneIDi100101763
KEGGixtr:100101763

Similar proteinsi

Entry informationi

Entry nameiA4II00_XENTR
AccessioniPrimary (citable) accession number: A4II00
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: May 1, 2007
Last modified: April 25, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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